Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC011330.2-201ENST00000621680 635 ntBASIC3.14□□□□□ -1.91
RIPK2O43353 AL392088.2-201ENST00000637607 285 ntBASIC3.14□□□□□ -1.91
RIPK2O43353 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RIPK2O43353 AC138915.1-201ENST00000565427 1685 ntBASIC3.14□□□□□ -1.91
RIPK2O43353 AC093010.3-201ENST00000570269 15214 ntBASIC3.14□□□□□ -1.91
RIPK2O43353 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.14□□□□□ -1.91
RIPK2O43353 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
RIPK2O43353 AC010680.1-201ENST00000590024 3590 ntBASIC3.13□□□□□ -1.91
RIPK2O43353 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
RIPK2O43353 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RIPK2O43353 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.13□□□□□ -1.91
RIPK2O43353 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RIPK2O43353 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RIPK2O43353 OR1S2-201ENST00000302592 978 ntBASIC3.13□□□□□ -1.91
RIPK2O43353 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.13□□□□□ -1.91
RIPK2O43353 RNU2-43P-201ENST00000410306 190 ntBASIC3.13□□□□□ -1.91
RIPK2O43353 RNU2-47P-201ENST00000410649 186 ntBASIC3.13□□□□□ -1.91
RIPK2O43353 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.13□□□□□ -1.91
RIPK2O43353 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.13□□□□□ -1.91
RIPK2O43353 HSPD1P21-201ENST00000436541 245 ntBASIC3.13□□□□□ -1.91
RIPK2O43353 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.13□□□□□ -1.91
RIPK2O43353 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.13□□□□□ -1.91
RIPK2O43353 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.13□□□□□ -1.91
RIPK2O43353 RPL30P5-201ENST00000494923 336 ntBASIC3.13□□□□□ -1.91
RIPK2O43353 AC026414.1-201ENST00000504046 698 ntBASIC3.13□□□□□ -1.91
RIPK2O43353 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.13□□□□□ -1.91
RIPK2O43353 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
RIPK2O43353 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.13□□□□□ -1.91
RIPK2O43353 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RIPK2O43353 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.13□□□□□ -1.91
RIPK2O43353 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.13□□□□□ -1.91
RIPK2O43353 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
RIPK2O43353 AADACP1-206ENST00000561502 1193 ntBASIC3.13□□□□□ -1.91
RIPK2O43353 AC010653.1-201ENST00000571108 881 ntBASIC3.13□□□□□ -1.91
RIPK2O43353 LARP7P2-201ENST00000575306 125 ntBASIC3.13□□□□□ -1.91
RIPK2O43353 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.13□□□□□ -1.91
RIPK2O43353 AC083760.1-201ENST00000589621 670 ntBASIC3.13□□□□□ -1.91
RIPK2O43353 U73023.1-201ENST00000603134 700 ntBASIC3.13□□□□□ -1.91
RIPK2O43353 AP001521.1-201ENST00000609150 300 ntBASIC3.13□□□□□ -1.91
RIPK2O43353 AC109454.4-201ENST00000623411 649 ntBASIC3.13□□□□□ -1.91
RIPK2O43353 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.13□□□□□ -1.91
RIPK2O43353 U6.101-201ENST00000637707 76 ntBASIC3.13□□□□□ -1.91
RIPK2O43353 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.13□□□□□ -1.91
RIPK2O43353 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RIPK2O43353 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.12□□□□□ -1.91
RIPK2O43353 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RIPK2O43353 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.12□□□□□ -1.91
RIPK2O43353 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.12□□□□□ -1.91
RIPK2O43353 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.12□□□□□ -1.91
RIPK2O43353 RAB9AP3-201ENST00000412737 573 ntBASIC3.12□□□□□ -1.91
RIPK2O43353 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.12□□□□□ -1.91
RIPK2O43353 AC019178.2-201ENST00000423595 505 ntBASIC3.12□□□□□ -1.91
RIPK2O43353 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.12□□□□□ -1.91
RIPK2O43353 AC093151.1-201ENST00000427711 313 ntBASIC3.12□□□□□ -1.91
RIPK2O43353 AL390023.1-201ENST00000428836 262 ntBASIC3.12□□□□□ -1.91
RIPK2O43353 AL035246.1-201ENST00000433554 1255 ntBASIC3.12□□□□□ -1.91
RIPK2O43353 SETP8-201ENST00000435341 628 ntBASIC3.12□□□□□ -1.91
RIPK2O43353 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.12□□□□□ -1.91
RIPK2O43353 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.12□□□□□ -1.91
RIPK2O43353 Z96811.1-201ENST00000445880 108 ntBASIC3.12□□□□□ -1.91
RIPK2O43353 COX6CP18-201ENST00000448769 222 ntBASIC3.12□□□□□ -1.91
RIPK2O43353 RAB9AP1-201ENST00000449393 573 ntBASIC3.12□□□□□ -1.91
RIPK2O43353 CYCSP35-201ENST00000451978 304 ntBASIC3.12□□□□□ -1.91
RIPK2O43353 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.12□□□□□ -1.91
RIPK2O43353 AL049714.1-201ENST00000466686 347 ntBASIC3.12□□□□□ -1.91
RIPK2O43353 AC009901.1-201ENST00000506703 541 ntBASIC3.12□□□□□ -1.91
RIPK2O43353 RNU5A-7P-201ENST00000515979 116 ntBASIC3.12□□□□□ -1.91
RIPK2O43353 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.12□□□□□ -1.91
RIPK2O43353 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.12□□□□□ -1.91
RIPK2O43353 AP001189.2-201ENST00000527320 189 ntBASIC3.12□□□□□ -1.91
RIPK2O43353 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RIPK2O43353 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.12□□□□□ -1.91
RIPK2O43353 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.12□□□□□ -1.91
RIPK2O43353 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.12□□□□□ -1.91
RIPK2O43353 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.12□□□□□ -1.91
RIPK2O43353 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.12□□□□□ -1.91
RIPK2O43353 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.12□□□□□ -1.91
RIPK2O43353 AC020895.1-201ENST00000595362 272 ntBASIC3.12□□□□□ -1.91
RIPK2O43353 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.12□□□□□ -1.91
RIPK2O43353 BNIP3P31-201ENST00000604515 566 ntBASIC3.12□□□□□ -1.91
RIPK2O43353 AL157770.1-201ENST00000623049 439 ntBASIC3.12□□□□□ -1.91
RIPK2O43353 AC093908.1-201ENST00000623125 8092 ntBASIC3.12□□□□□ -1.91
RIPK2O43353 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.12□□□□□ -1.91
RIPK2O43353 AC087821.2-201ENST00000637086 450 ntBASIC3.12□□□□□ -1.91
RIPK2O43353 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RIPK2O43353 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.11□□□□□ -1.91
RIPK2O43353 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
RIPK2O43353 MIR135A2-201ENST00000384854 100 ntBASIC3.11□□□□□ -1.91
RIPK2O43353 MIR218-2-201ENST00000385006 110 ntBASIC3.11□□□□□ -1.91
RIPK2O43353 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
RIPK2O43353 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RIPK2O43353 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RIPK2O43353 RN7SKP159-201ENST00000410657 292 ntBASIC3.11□□□□□ -1.91
RIPK2O43353 AC069282.1-201ENST00000411911 526 ntBASIC3.11□□□□□ -1.91
RIPK2O43353 AL024507.1-201ENST00000412741 274 ntBASIC3.11□□□□□ -1.91
RIPK2O43353 RPL7P10-201ENST00000417407 739 ntBASIC3.11□□□□□ -1.91
RIPK2O43353 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.11□□□□□ -1.91
RIPK2O43353 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.11□□□□□ -1.91
RIPK2O43353 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.11□□□□□ -1.91
RIPK2O43353 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms