Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
PHGDHO43175 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PHGDHO43175 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PHGDHO43175 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PHGDHO43175 RNA5SP175-201ENST00000364275 119 ntBASIC4.26□□□□□ -1.73
PHGDHO43175 RNU6-1074P-201ENST00000383995 104 ntBASIC4.26□□□□□ -1.73
PHGDHO43175 RNU6-754P-201ENST00000391166 107 ntBASIC4.26□□□□□ -1.73
PHGDHO43175 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
PHGDHO43175 RNU2-43P-201ENST00000410306 190 ntBASIC4.26□□□□□ -1.73
PHGDHO43175 RNU4-55P-201ENST00000410731 137 ntBASIC4.26□□□□□ -1.73
PHGDHO43175 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
PHGDHO43175 AC137499.1-201ENST00000427602 88 ntBASIC4.26□□□□□ -1.73
PHGDHO43175 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.26□□□□□ -1.73
PHGDHO43175 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.26□□□□□ -1.73
PHGDHO43175 NPM1P49-201ENST00000448027 714 ntBASIC4.26□□□□□ -1.73
PHGDHO43175 PSPHP1-201ENST00000450062 261 ntBASIC4.26□□□□□ -1.73
PHGDHO43175 AL451050.1-201ENST00000450126 415 ntBASIC4.26□□□□□ -1.73
PHGDHO43175 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.26□□□□□ -1.73
PHGDHO43175 AC104164.2-201ENST00000496953 495 ntBASIC4.26□□□□□ -1.73
PHGDHO43175 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.26□□□□□ -1.73
PHGDHO43175 HMGB1P29-201ENST00000505659 499 ntBASIC4.26□□□□□ -1.73
PHGDHO43175 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.26□□□□□ -1.73
PHGDHO43175 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.26□□□□□ -1.73
PHGDHO43175 IGLVIV-65-201ENST00000517313 360 ntBASIC4.26□□□□□ -1.73
PHGDHO43175 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.26□□□□□ -1.73
PHGDHO43175 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.26□□□□□ -1.73
PHGDHO43175 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.26□□□□□ -1.73
PHGDHO43175 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.26□□□□□ -1.73
PHGDHO43175 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.26□□□□□ -1.73
PHGDHO43175 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.26□□□□□ -1.73
PHGDHO43175 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.26□□□□□ -1.73
PHGDHO43175 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.26□□□□□ -1.73
PHGDHO43175 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.26□□□□□ -1.73
PHGDHO43175 AC087481.2-201ENST00000565492 330 ntBASIC4.26□□□□□ -1.73
PHGDHO43175 MIR3167-201ENST00000579623 85 ntBASIC4.26□□□□□ -1.73
PHGDHO43175 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.26□□□□□ -1.73
PHGDHO43175 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.26□□□□□ -1.73
PHGDHO43175 BNIP3P33-201ENST00000598912 569 ntBASIC4.26□□□□□ -1.73
PHGDHO43175 MIR432-201ENST00000606207 94 ntBASIC4.26□□□□□ -1.73
PHGDHO43175 AF250324.2-201ENST00000608299 610 ntBASIC4.26□□□□□ -1.73
PHGDHO43175 AC012409.3-201ENST00000611343 981 ntBASIC4.26□□□□□ -1.73
PHGDHO43175 MIR6780A-201ENST00000615089 68 ntBASIC4.26□□□□□ -1.73
PHGDHO43175 MIR6130-201ENST00000619419 109 ntBASIC4.26□□□□□ -1.73
PHGDHO43175 CR381653.2-201ENST00000624041 768 ntBASIC4.26□□□□□ -1.73
PHGDHO43175 AC124864.2-201ENST00000624736 186 ntBASIC4.26□□□□□ -1.73
PHGDHO43175 AL160394.1-201ENST00000624765 724 ntBASIC4.26□□□□□ -1.73
PHGDHO43175 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PHGDHO43175 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PHGDHO43175 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PHGDHO43175 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PHGDHO43175 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
PHGDHO43175 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PHGDHO43175 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PHGDHO43175 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
PHGDHO43175 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
PHGDHO43175 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PHGDHO43175 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PHGDHO43175 OR1S2-201ENST00000302592 978 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 OR4K15-201ENST00000305051 1216 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.25□□□□□ -1.73
PHGDHO43175 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
PHGDHO43175 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PHGDHO43175 RNU4-65P-201ENST00000410473 140 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.25□□□□□ -1.73
PHGDHO43175 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.25□□□□□ -1.73
PHGDHO43175 ISCA1P1-201ENST00000426679 387 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 AL732292.1-201ENST00000426692 226 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.25□□□□□ -1.73
PHGDHO43175 AC073464.1-201ENST00000429823 534 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 USP9YP7-201ENST00000436723 430 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.25□□□□□ -1.73
PHGDHO43175 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.25□□□□□ -1.73
PHGDHO43175 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.25□□□□□ -1.73
PHGDHO43175 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.25□□□□□ -1.73
PHGDHO43175 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.25□□□□□ -1.73
PHGDHO43175 USP9YP32-201ENST00000452432 430 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.25□□□□□ -1.73
PHGDHO43175 HMGB3P30-201ENST00000457863 606 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 AC004924.1-201ENST00000480160 781 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 AC114797.1-201ENST00000514003 728 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 SNORA31.20-201ENST00000517111 133 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 MTND4LP26-201ENST00000518144 282 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.25□□□□□ -1.73
PHGDHO43175 AC022616.3-201ENST00000523940 148 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 FAM92A1P1-201ENST00000528023 890 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 AP006289.1-201ENST00000538089 277 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 AC005832.2-201ENST00000538921 1430 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 AC006064.5-201ENST00000541782 248 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 AC125611.2-201ENST00000551907 647 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 AC124947.2-202ENST00000552735 133 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 AL109766.1-201ENST00000555080 552 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.25□□□□□ -1.73
PHGDHO43175 TPRKBP2-201ENST00000565969 475 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.25□□□□□ -1.73
PHGDHO43175 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.25□□□□□ -1.73
PHGDHO43175 AC068790.5-201ENST00000602741 355 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 AC119501.1-201ENST00000603646 475 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 AL034351.1-201ENST00000605288 668 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 AC093838.1-201ENST00000613014 469 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms