Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AC139495.1-202ENST00000513164 354 ntBASIC4.08□□□□□ -1.76
PCDH17O14917 FTH1P9-201ENST00000513251 355 ntBASIC4.08□□□□□ -1.76
PCDH17O14917 AC026801.2-201ENST00000515352 425 ntBASIC4.08□□□□□ -1.76
PCDH17O14917 RNU6-720P-201ENST00000516363 108 ntBASIC4.08□□□□□ -1.76
PCDH17O14917 RNA5SP73-201ENST00000516744 108 ntBASIC4.08□□□□□ -1.76
PCDH17O14917 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDH17O14917 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDH17O14917 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDH17O14917 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDH17O14917 AC012182.1-201ENST00000570133 895 ntBASIC4.08□□□□□ -1.76
PCDH17O14917 MTND1P15-201ENST00000579262 949 ntBASIC4.08□□□□□ -1.76
PCDH17O14917 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.08□□□□□ -1.76
PCDH17O14917 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDH17O14917 AC068790.6-201ENST00000602558 258 ntBASIC4.08□□□□□ -1.76
PCDH17O14917 DUXAP4-201ENST00000603046 613 ntBASIC4.08□□□□□ -1.76
PCDH17O14917 AC012669.1-201ENST00000603209 283 ntBASIC4.08□□□□□ -1.76
PCDH17O14917 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDH17O14917 AL031666.3-201ENST00000609320 1006 ntBASIC4.08□□□□□ -1.76
PCDH17O14917 Z99129.1-201ENST00000612510 255 ntBASIC4.08□□□□□ -1.76
PCDH17O14917 AC008498.1-201ENST00000613012 531 ntBASIC4.08□□□□□ -1.76
PCDH17O14917 MIR8059-201ENST00000620427 81 ntBASIC4.08□□□□□ -1.76
PCDH17O14917 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDH17O14917 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.08□□□□□ -1.76
PCDH17O14917 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PCDH17O14917 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCDH17O14917 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
PCDH17O14917 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCDH17O14917 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDH17O14917 RNU1-64P-201ENST00000365443 163 ntBASIC4.07□□□□□ -1.76
PCDH17O14917 RNU5A-6P-201ENST00000384136 116 ntBASIC4.07□□□□□ -1.76
PCDH17O14917 SNORD3H-201ENST00000384486 214 ntBASIC4.07□□□□□ -1.76
PCDH17O14917 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.07□□□□□ -1.76
PCDH17O14917 HMGN1P24-201ENST00000412282 298 ntBASIC4.07□□□□□ -1.76
PCDH17O14917 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDH17O14917 RPS20P14-201ENST00000412545 360 ntBASIC4.07□□□□□ -1.76
PCDH17O14917 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCDH17O14917 HMGB3P23-201ENST00000414981 585 ntBASIC4.07□□□□□ -1.76
PCDH17O14917 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.07□□□□□ -1.76
PCDH17O14917 RBMY1KP-201ENST00000423480 476 ntBASIC4.07□□□□□ -1.76
PCDH17O14917 AC010975.2-201ENST00000427781 588 ntBASIC4.07□□□□□ -1.76
PCDH17O14917 USP9YP14-201ENST00000430663 563 ntBASIC4.07□□□□□ -1.76
PCDH17O14917 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDH17O14917 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDH17O14917 RAC1P7-201ENST00000445367 377 ntBASIC4.07□□□□□ -1.76
PCDH17O14917 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDH17O14917 AL451050.1-201ENST00000450126 415 ntBASIC4.07□□□□□ -1.76
PCDH17O14917 RPL23AP81-201ENST00000455252 467 ntBASIC4.07□□□□□ -1.76
PCDH17O14917 HMGB3P30-201ENST00000457863 606 ntBASIC4.07□□□□□ -1.76
PCDH17O14917 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDH17O14917 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDH17O14917 RPL7P23-201ENST00000493874 747 ntBASIC4.07□□□□□ -1.76
PCDH17O14917 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDH17O14917 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDH17O14917 MTND4LP31-201ENST00000514859 294 ntBASIC4.07□□□□□ -1.76
PCDH17O14917 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDH17O14917 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDH17O14917 PHBP17-201ENST00000528576 541 ntBASIC4.07□□□□□ -1.76
PCDH17O14917 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDH17O14917 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDH17O14917 AC106785.1-201ENST00000565935 262 ntBASIC4.07□□□□□ -1.76
PCDH17O14917 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.07□□□□□ -1.76
PCDH17O14917 COX6CP3-201ENST00000580869 223 ntBASIC4.07□□□□□ -1.76
PCDH17O14917 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDH17O14917 HMGN1P30-201ENST00000589286 268 ntBASIC4.07□□□□□ -1.76
PCDH17O14917 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDH17O14917 SNRPGP15-201ENST00000600149 222 ntBASIC4.07□□□□□ -1.76
PCDH17O14917 AL158211.4-201ENST00000606988 584 ntBASIC4.07□□□□□ -1.76
PCDH17O14917 AL355472.4-201ENST00000610233 626 ntBASIC4.07□□□□□ -1.76
PCDH17O14917 AC090970.3-201ENST00000612566 866 ntBASIC4.07□□□□□ -1.76
PCDH17O14917 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDH17O14917 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDH17O14917 AC106871.1-201ENST00000568324 3102 ntBASIC4.07□□□□□ -1.76
PCDH17O14917 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDH17O14917 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDH17O14917 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDH17O14917 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCDH17O14917 AC004925.1-201ENST00000624256 2706 ntBASIC4.07□□□□□ -1.76
PCDH17O14917 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDH17O14917 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PCDH17O14917 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDH17O14917 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDH17O14917 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDH17O14917 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDH17O14917 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
PCDH17O14917 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PCDH17O14917 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDH17O14917 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.06□□□□□ -1.76
PCDH17O14917 MIR383-201ENST00000362257 73 ntBASIC4.06□□□□□ -1.76
PCDH17O14917 RNU5A-8P-201ENST00000364102 114 ntBASIC4.06□□□□□ -1.76
PCDH17O14917 Y_RNA.582-201ENST00000391023 95 ntBASIC4.06□□□□□ -1.76
PCDH17O14917 SNORA48.7-201ENST00000391302 135 ntBASIC4.06□□□□□ -1.76
PCDH17O14917 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDH17O14917 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.06□□□□□ -1.76
PCDH17O14917 RNU2-66P-201ENST00000410650 161 ntBASIC4.06□□□□□ -1.76
PCDH17O14917 MIR1911-201ENST00000410783 80 ntBASIC4.06□□□□□ -1.76
PCDH17O14917 RN7SKP33-201ENST00000410942 340 ntBASIC4.06□□□□□ -1.76
PCDH17O14917 RAD23BP2-201ENST00000416003 1207 ntBASIC4.06□□□□□ -1.76
PCDH17O14917 RPS23P10-201ENST00000416185 486 ntBASIC4.06□□□□□ -1.76
PCDH17O14917 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDH17O14917 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms