Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 snoU13.28-201ENST00000459235 104 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 RPS26P21-201ENST00000475397 348 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 SNORA31.21-201ENST00000517180 77 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 AC010376.1-201ENST00000522101 334 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 MTND3P13-201ENST00000574391 343 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 RN7SL753P-201ENST00000581238 290 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 AC020895.1-201ENST00000595362 272 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 AC013553.2-201ENST00000604244 589 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 AL158211.4-201ENST00000606988 584 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 AC092574.1-201ENST00000609771 420 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 MLECP1-201ENST00000615893 709 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 AL445264.1-201ENST00000621719 171 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 AC008443.7-201ENST00000622195 246 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 AC243312.2-201ENST00000623340 601 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 AC110079.1-202ENST00000635213 138 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 MTND5P24-201ENST00000438892 1767 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 Z83843.1-201ENST00000604070 3685 ntBASIC2.4□□□□□ -2.02
SMKR1H3BMG3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
SMKR1H3BMG3 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
SMKR1H3BMG3 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.4□□□□□ -2.02
SMKR1H3BMG3 AP000526.1-201ENST00000603308 1388 ntBASIC2.4□□□□□ -2.02
SMKR1H3BMG3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.4□□□□□ -2.03
SMKR1H3BMG3 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
SMKR1H3BMG3 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
SMKR1H3BMG3 RNU6-270P-201ENST00000364131 105 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 SNORA58B-201ENST00000364259 136 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 Y_RNA.234-201ENST00000364409 97 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC2.4□□□□□ -2.03
SMKR1H3BMG3 MIR514A1-201ENST00000385133 98 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
SMKR1H3BMG3 RNU6-952P-201ENST00000391164 108 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 RPS4XP9-201ENST00000405151 780 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SMKR1H3BMG3 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SMKR1H3BMG3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.4□□□□□ -2.03
SMKR1H3BMG3 SAR1AP4-201ENST00000429225 591 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 AC104332.2-201ENST00000429959 156 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 RPL23AP69-201ENST00000431134 458 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.4□□□□□ -2.03
SMKR1H3BMG3 AC129850.1-201ENST00000436203 508 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.4□□□□□ -2.03
SMKR1H3BMG3 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC2.4□□□□□ -2.03
SMKR1H3BMG3 RPL26P28-201ENST00000451325 435 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 AC097493.1-201ENST00000463958 372 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.4□□□□□ -2.03
SMKR1H3BMG3 RPL7P38-201ENST00000488396 739 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SMKR1H3BMG3 AC010460.1-201ENST00000507087 466 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC2.4□□□□□ -2.03
SMKR1H3BMG3 AC026801.2-201ENST00000515352 425 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 SCARNA15.2-201ENST00000516409 127 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 RNU6-1282P-201ENST00000516735 96 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 RNU6-928P-201ENST00000516876 104 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.4□□□□□ -2.03
SMKR1H3BMG3 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.4□□□□□ -2.03
SMKR1H3BMG3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.4□□□□□ -2.03
SMKR1H3BMG3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.4□□□□□ -2.03
SMKR1H3BMG3 AC015917.1-201ENST00000579654 510 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 RPL23AP78-201ENST00000599928 470 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 AC004987.4-201ENST00000603383 338 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 AC068313.1-201ENST00000604028 1008 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 AL591516.1-201ENST00000611326 274 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 MIR6875-201ENST00000617506 72 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 AC068880.5-201ENST00000624331 290 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 OR5H6-203ENST00000642105 978 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SMKR1H3BMG3 SDAD1P2-201ENST00000441308 2028 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 AL022578.1-201ENST00000439330 1433 ntBASIC2.4□□□□□ -2.03
SMKR1H3BMG3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SMKR1H3BMG3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.4□□□□□ -2.03
SMKR1H3BMG3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.39□□□□□ -2.03
SMKR1H3BMG3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
SMKR1H3BMG3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SMKR1H3BMG3 SNORD21-201ENST00000383953 95 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 SNORA36C-201ENST00000384289 132 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 RNU6-1035P-201ENST00000384477 107 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 Y_RNA.548-201ENST00000384656 105 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 RN7SKP156-201ENST00000410308 342 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 RPL26P29-201ENST00000415623 438 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 SPA17P1-201ENST00000416656 452 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.39□□□□□ -2.03
SMKR1H3BMG3 TIMM9P2-201ENST00000419324 266 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 SDCBPP3-201ENST00000419629 891 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 AL353678.1-201ENST00000422735 741 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 RPL18P10-201ENST00000425606 538 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 RPL7L1P10-201ENST00000427790 463 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms