Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PRDX3P3-201ENST00000447765 522 ntBASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 PAXBP1P1-201ENST00000449315 447 ntBASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 AC010655.1-201ENST00000449336 292 ntBASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 AC017015.1-201ENST00000477387 286 ntBASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 AC118282.1-201ENST00000506408 765 ntBASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 HMGB3P15-201ENST00000507326 574 ntBASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 AC024589.1-201ENST00000512207 263 ntBASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 AC009094.1-201ENST00000564443 426 ntBASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 FAM60BP-201ENST00000578364 658 ntBASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 AP001330.4-201ENST00000604350 154 ntBASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 AL590099.1-201ENST00000615276 138 ntBASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 MIR8058-201ENST00000615737 89 ntBASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 AL590240.3-201ENST00000621416 943 ntBASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 FAM35DP-201ENST00000323387 2712 ntBASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 MAPK10-253ENST00000641010 4072 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AC087359.1-201ENST00000508335 1740 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AC011477.1-204ENST00000623416 1325 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 RPL21P132-201ENST00000331267 462 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AL161781.1-201ENST00000354277 403 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 RNU6-1155P-201ENST00000363554 107 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 Y_RNA.234-201ENST00000364409 97 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 RNU6-723P-201ENST00000383973 107 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 RNU1-89P-201ENST00000384592 164 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 MIR183-201ENST00000384958 110 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 MIR34B-201ENST00000385076 84 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 HMGN2P8-201ENST00000391458 268 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 RNA5SP129-201ENST00000410276 118 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AC098592.1-201ENST00000419352 333 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AC011233.1-201ENST00000422812 283 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 CYCSP43-201ENST00000438233 310 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AL591503.2-201ENST00000442314 1005 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 MTCO3P20-201ENST00000454926 688 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 RPS4XP13-201ENST00000483219 789 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 BTF3L4P4-201ENST00000506381 449 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 RN7SKP83-201ENST00000516512 178 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 SNRPGP16-201ENST00000533275 226 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AC008011.1-201ENST00000545989 227 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AC090888.2-201ENST00000559765 1144 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AL360157.1-201ENST00000565962 87 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AC007179.3-201ENST00000604976 235 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AL139344.1-201ENST00000605228 195 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AC090186.1-201ENST00000605991 572 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AC006023.2-201ENST00000609916 167 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AC243312.2-201ENST00000623340 601 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 AP000553.6-201ENST00000641242 118 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms