Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 AL022394.1-201ENST00000606979 292 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 ATP5A1P2-202ENST00000616464 443 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 SNHG22-203ENST00000617833 660 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 AC103705.1-201ENST00000619013 241 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 FAM91A3P-201ENST00000456826 2544 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 DDX10P1-201ENST00000448545 1933 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 AL137003.2-201ENST00000606924 2538 ntBASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 XIAPP3-201ENST00000312918 795 ntBASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 Y_RNA.273-201ENST00000364703 102 ntBASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 Y_RNA.398-201ENST00000383952 99 ntBASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 RNU6-398P-201ENST00000384143 109 ntBASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 Y_RNA.576-201ENST00000384781 102 ntBASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 RPL7P46-201ENST00000425129 740 ntBASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 RPS27AP12-201ENST00000429552 465 ntBASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 AC087650.1-201ENST00000431445 468 ntBASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 RN7SL189P-201ENST00000468631 289 ntBASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 AC114982.1-201ENST00000469402 321 ntBASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 AC109925.1-201ENST00000478069 331 ntBASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 AC021146.3-201ENST00000511911 260 ntBASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 RNU2-31P-201ENST00000516954 155 ntBASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 RNU6-897P-201ENST00000517135 105 ntBASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 AC002044.1-201ENST00000606707 158 ntBASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 AC104465.1-201ENST00000611365 139 ntBASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 AL512624.1-201ENST00000613638 469 ntBASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 MIR4272-201ENST00000635924 64 ntBASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 ZNF33CP-201ENST00000432492 2030 ntBASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.79□□□□□ -1.48
DNMT3AQ9Y6K1 AC020656.2-201ENST00000613291 5309 ntBASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 AC090740.1-201ENST00000623193 2262 ntBASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 AL359955.1-201ENST00000455242 3275 ntBASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 RNU6-188P-201ENST00000364207 107 ntBASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 RN7SKP15-201ENST00000364742 309 ntBASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 RNU1-59P-201ENST00000364829 162 ntBASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 RNU6-1203P-201ENST00000410703 110 ntBASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 AC114491.1-201ENST00000416095 246 ntBASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 RPS20P1-201ENST00000434853 354 ntBASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 AL136097.1-201ENST00000456945 913 ntBASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 RNU1-88P-201ENST00000459274 128 ntBASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 RPL21P8-201ENST00000465083 535 ntBASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 HMGB1P25-201ENST00000468402 607 ntBASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 RPS17P15-201ENST00000475609 349 ntBASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 AC105758.1-201ENST00000506038 399 ntBASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 AC108078.2-201ENST00000510750 236 ntBASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 HIGD1AP3-201ENST00000515857 278 ntBASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 SNORA70.11-201ENST00000515987 138 ntBASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 SNORD116-26-201ENST00000516006 96 ntBASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 SNORA70.13-201ENST00000516116 138 ntBASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 RANP3-201ENST00000530970 276 ntBASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 AC004584.2-201ENST00000570407 410 ntBASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.78□□□□□ -1.48
DNMT3AQ9Y6K1 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms