Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 AC107081.1-201ENST00000414975 361 ntBASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 AL096701.2-201ENST00000416920 238 ntBASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 AC092436.1-201ENST00000506450 503 ntBASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 RNU1-61P-201ENST00000516107 151 ntBASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 AC019227.1-201ENST00000526902 510 ntBASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 AC009220.3-201ENST00000604318 586 ntBASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 AC073111.2-201ENST00000605657 1075 ntBASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 CR589904.2-201ENST00000612533 440 ntBASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 AL136164.4-201ENST00000625013 2135 ntBASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 SNORA50A-202ENST00000629536 136 ntBASIC2.52□□□□□ -2.01
SCN10AQ9Y5Y9 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SCN10AQ9Y5Y9 NDUFB4P5-201ENST00000415445 361 ntBASIC2.51□□□□□ -2.01
SCN10AQ9Y5Y9 MTCYBP24-201ENST00000420387 1106 ntBASIC2.51□□□□□ -2.01
SCN10AQ9Y5Y9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SCN10AQ9Y5Y9 ARL5AP3-201ENST00000439327 386 ntBASIC2.51□□□□□ -2.01
SCN10AQ9Y5Y9 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.51□□□□□ -2.01
SCN10AQ9Y5Y9 AC104308.1-201ENST00000454621 333 ntBASIC2.51□□□□□ -2.01
SCN10AQ9Y5Y9 RPS20P22-201ENST00000473700 357 ntBASIC2.51□□□□□ -2.01
SCN10AQ9Y5Y9 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.51□□□□□ -2.01
SCN10AQ9Y5Y9 MTCYBP37-201ENST00000510642 1133 ntBASIC2.51□□□□□ -2.01
SCN10AQ9Y5Y9 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.51□□□□□ -2.01
SCN10AQ9Y5Y9 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SCN10AQ9Y5Y9 RANP3-201ENST00000530970 276 ntBASIC2.51□□□□□ -2.01
SCN10AQ9Y5Y9 AC010198.2-201ENST00000550612 259 ntBASIC2.51□□□□□ -2.01
SCN10AQ9Y5Y9 SYF2P1-201ENST00000550658 413 ntBASIC2.51□□□□□ -2.01
SCN10AQ9Y5Y9 AC025281.1-201ENST00000567026 265 ntBASIC2.51□□□□□ -2.01
SCN10AQ9Y5Y9 NRBF2P1-201ENST00000587407 859 ntBASIC2.51□□□□□ -2.01
SCN10AQ9Y5Y9 AC006116.7-201ENST00000590141 756 ntBASIC2.51□□□□□ -2.01
SCN10AQ9Y5Y9 AC099778.2-201ENST00000610904 211 ntBASIC2.51□□□□□ -2.01
SCN10AQ9Y5Y9 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SCN10AQ9Y5Y9 MAPK10-322ENST00000641485 4530 ntBASIC2.51□□□□□ -2.01
SCN10AQ9Y5Y9 SNORA64-201ENST00000384674 134 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 MIR1250-201ENST00000408098 113 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 PSMA2P3-201ENST00000429685 675 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 RPS15AP1-201ENST00000457423 391 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 HMGB1P38-201ENST00000490557 577 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 AC108210.2-201ENST00000503681 201 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 AC025857.1-201ENST00000525252 377 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 AP003717.3-201ENST00000544832 1180 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 AC025260.1-201ENST00000548858 430 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 POLR2KP1-201ENST00000553226 168 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 AC069234.5-201ENST00000611056 416 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 AC002076.2-201ENST00000617362 122 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 RNU1-91P-201ENST00000364746 163 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 RNU6-629P-201ENST00000384061 103 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 AL138880.1-201ENST00000405824 642 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 RPL23AP47-201ENST00000408017 460 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 AC091179.1-201ENST00000461606 579 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 RPL21P18-201ENST00000469899 480 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 MTND4LP22-201ENST00000508209 276 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 RNU6-491P-201ENST00000516099 110 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 AC008562.1-201ENST00000521763 330 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 AF279873.1-201ENST00000523393 313 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 MTCYBP20-201ENST00000524239 1129 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 AC113194.1-201ENST00000606037 500 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 AC107294.3-201ENST00000609211 526 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 AC103798.2-201ENST00000624292 632 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 MIR6733-201ENST00000635723 61 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 AC117529.2-201ENST00000512159 2068 ntBASIC2.5□□□□□ -2.01
SCN10AQ9Y5Y9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
SCN10AQ9Y5Y9 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SCN10AQ9Y5Y9 RNU6-76P-201ENST00000384060 104 ntBASIC2.49□□□□□ -2.01
SCN10AQ9Y5Y9 AC023128.2-201ENST00000420880 1223 ntBASIC2.49□□□□□ -2.01
SCN10AQ9Y5Y9 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.49□□□□□ -2.01
SCN10AQ9Y5Y9 MTCO3P11-201ENST00000455103 774 ntBASIC2.49□□□□□ -2.01
SCN10AQ9Y5Y9 KATNBL1P4-201ENST00000503545 918 ntBASIC2.49□□□□□ -2.01
SCN10AQ9Y5Y9 PCNAP1-201ENST00000505363 709 ntBASIC2.49□□□□□ -2.01
SCN10AQ9Y5Y9 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.49□□□□□ -2.01
SCN10AQ9Y5Y9 AC104115.2-201ENST00000523026 687 ntBASIC2.49□□□□□ -2.01
SCN10AQ9Y5Y9 MTCYBP41-201ENST00000528913 1123 ntBASIC2.49□□□□□ -2.01
SCN10AQ9Y5Y9 FAM35CP-201ENST00000554755 2470 ntBASIC2.49□□□□□ -2.01
SCN10AQ9Y5Y9 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SCN10AQ9Y5Y9 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SCN10AQ9Y5Y9 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SCN10AQ9Y5Y9 METTL21EP-201ENST00000298105 713 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms