Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 MAPK10-349ENST00000641767 3661 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.46□□□□□ -1.69
PCDHB1Q9Y5F3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
PCDHB1Q9Y5F3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
PCDHB1Q9Y5F3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
PCDHB1Q9Y5F3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
PCDHB1Q9Y5F3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.69
PCDHB1Q9Y5F3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.69
PCDHB1Q9Y5F3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 OR52B1P-201ENST00000316506 909 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 RNA5SP151-201ENST00000365632 117 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 SNORA20.2-201ENST00000383922 131 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 Y_RNA.450-201ENST00000384198 113 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 RNU1-44P-201ENST00000384453 163 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 SNORA70C-201ENST00000384538 135 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 Y_RNA.573-201ENST00000384763 105 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 MIR659-201ENST00000384963 97 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 RNA5SP372-201ENST00000390836 115 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 RNU6-278P-201ENST00000390945 109 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 RN7SKP285-201ENST00000410137 318 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 AL356387.2-201ENST00000422272 243 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 NUTF2P3-201ENST00000448540 384 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 AC012671.1-201ENST00000451912 203 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 AC108059.3-201ENST00000456388 214 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 RN7SL303P-201ENST00000469773 251 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 DEFB109F-201ENST00000491870 277 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 AC019235.1-201ENST00000503847 207 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 RNA5SP497-201ENST00000516081 97 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 OR5AQ1P-201ENST00000527596 927 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 CR383656.7-201ENST00000548164 174 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 COX6CP3-201ENST00000580869 223 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 AC007363.1-201ENST00000604736 620 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 IGHV3-29-201ENST00000604817 344 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 AC004908.2-201ENST00000609090 574 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 AC017083.3-201ENST00000609955 700 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 AL359314.1-201ENST00000616913 261 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 AL356585.4-201ENST00000623078 1229 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 AL138713.1-201ENST00000624026 2130 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 Z73965.1-201ENST00000623412 2297 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.46□□□□□ -1.7
PCDHB1Q9Y5F3 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 RNY4P14-201ENST00000363656 96 ntBASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 RNU5A-8P-201ENST00000364102 114 ntBASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 RNU6-1078P-201ENST00000364522 103 ntBASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 Y_RNA.481-201ENST00000384373 102 ntBASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 MIR23A-201ENST00000385245 73 ntBASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 RNU6-837P-201ENST00000391056 108 ntBASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 CALM2P3-201ENST00000400429 449 ntBASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 MIR1277-201ENST00000408536 78 ntBASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 TIMM9P1-201ENST00000436122 256 ntBASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 AL121601.2-201ENST00000438019 707 ntBASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 RAC1P7-201ENST00000445367 377 ntBASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 AC079382.1-201ENST00000493346 557 ntBASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 AC017037.2-201ENST00000513850 890 ntBASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 RNU6-528P-201ENST00000516926 100 ntBASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 HMGB1P19-201ENST00000517578 577 ntBASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 HMGN1P28-201ENST00000521340 364 ntBASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 AP000827.1-201ENST00000527814 258 ntBASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 AL512310.1-201ENST00000548639 172 ntBASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 HMGB1P33-201ENST00000563485 527 ntBASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHB1Q9Y5F3 MIR3167-201ENST00000579623 85 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms