Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 KHDC1P1-201ENST00000511053 508 ntBASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 Y_RNA.679-201ENST00000516416 91 ntBASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 RNU6-919P-201ENST00000516731 104 ntBASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 AL590705.4-201ENST00000532209 134 ntBASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 MFSD8-219ENST00000641228 2559 ntBASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 BTBD10P1-201ENST00000549824 1352 ntBASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 RNU6-326P-201ENST00000365480 107 ntBASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 Y_RNA.435-201ENST00000384095 112 ntBASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 SNORA77.2-201ENST00000408571 112 ntBASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 RNU2-61P-201ENST00000411069 191 ntBASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 AL035422.1-201ENST00000414193 397 ntBASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 DPPA2P2-201ENST00000418220 897 ntBASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 AC008267.6-201ENST00000441664 139 ntBASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 RNU6-1037P-201ENST00000459571 107 ntBASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 RPS18P6-201ENST00000476880 458 ntBASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 ZNF519P4-201ENST00000514008 125 ntBASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 IGHV4-55-201ENST00000520889 368 ntBASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 AC025755.1-201ENST00000521306 278 ntBASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 TPRX1P1-201ENST00000557620 319 ntBASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 RN7SL753P-201ENST00000581238 290 ntBASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 BDH2P1-201ENST00000602288 736 ntBASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 AC123912.5-201ENST00000605470 343 ntBASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 SMG1P7-201ENST00000565246 2704 ntBASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB3Q9Y5E6 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 AC092692.1-201ENST00000623625 2595 ntBASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 Y_RNA.324-201ENST00000365165 102 ntBASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 AC010154.1-201ENST00000425857 269 ntBASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 IGKV1OR9-2-201ENST00000431378 277 ntBASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 MTCO1P5-201ENST00000433573 344 ntBASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 AC234775.1-201ENST00000454247 670 ntBASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 RNU6-953P-201ENST00000459154 107 ntBASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 Y_RNA.638-201ENST00000459374 113 ntBASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 AC068228.1-201ENST00000461723 211 ntBASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 HMGB1P25-201ENST00000468402 607 ntBASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 AC022206.1-201ENST00000495947 347 ntBASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 AP004609.2-201ENST00000532177 190 ntBASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 H3F3AP1-201ENST00000559984 334 ntBASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 FAM60BP-201ENST00000578364 658 ntBASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 RPSAP75-201ENST00000605848 301 ntBASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.09□□□□□ -1.43
PCDHB3Q9Y5E6 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms