Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AL079343.1-201ENST00000572358 1771 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 SGO1P2-201ENST00000429458 1589 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 ZNF826P-207ENST00000622273 1910 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 MTCO1P12-201ENST00000414273 1543 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 AL390862.1-201ENST00000635467 1469 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 RNU6-621P-201ENST00000364752 109 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 Y_RNA.311-201ENST00000365068 96 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 RNU6-1074P-201ENST00000383995 104 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 RN7SKP285-201ENST00000410137 318 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 TIMM9P2-201ENST00000419324 266 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 AP000907.1-201ENST00000428428 510 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 AL159987.2-201ENST00000432754 307 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 MUPP-201ENST00000438111 566 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 Z82190.1-201ENST00000454534 490 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 RPL18AP17-201ENST00000455326 198 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 AP001992.1-205ENST00000462248 379 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 RPL7P49-201ENST00000471402 708 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 AC108729.1-201ENST00000487812 947 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 AC020893.1-201ENST00000502452 580 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 TMEM251P1-201ENST00000503717 318 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 WBP1LP4-201ENST00000505043 344 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 COX7A2P2-201ENST00000505291 250 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 XKRY-201ENST00000510392 1100 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 AC079395.1-201ENST00000510981 262 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 FABP5P12-201ENST00000515543 389 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 RNU6-583P-201ENST00000516012 92 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 SNORA31.8-201ENST00000516327 108 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 TGIF1P1-201ENST00000558095 802 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 AP001029.3-201ENST00000588063 596 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 RNVU1-4-201ENST00000612985 164 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 AL356473.1-201ENST00000406203 1408 ntBASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
ATG4BQ9Y4P1 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 OR5BR1P-201ENST00000524992 1330 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 RNU6-1155P-201ENST00000363554 107 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 RNA5SP50-201ENST00000363731 107 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 SNORD46.1-201ENST00000364139 104 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 Z99755.1-201ENST00000414048 380 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 ELOCP9-201ENST00000418624 239 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 BX842559.1-201ENST00000419615 532 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 AL139421.1-201ENST00000423010 169 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 AC019178.2-201ENST00000423595 505 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 AC006946.1-201ENST00000429106 328 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 ARPC3P5-201ENST00000448802 534 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 AC005297.2-201ENST00000450430 606 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 RPL26P28-201ENST00000451325 435 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 MRPS31P2-201ENST00000451581 518 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 CYCSP35-201ENST00000451978 304 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 PRSS3P4-201ENST00000453323 162 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 RPS4XP2-201ENST00000458402 793 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 RPL7P38-201ENST00000488396 739 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 MLLT10P2-201ENST00000506434 249 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 KLHL2P1-201ENST00000508691 521 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 IGKV2-26-201ENST00000518305 343 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 AC007458.1-201ENST00000542812 373 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 AC010198.2-201ENST00000550612 259 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 MTND1P24-201ENST00000552175 861 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 AC009220.3-201ENST00000604318 586 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 MIR8058-201ENST00000615737 89 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 AC231657.1-201ENST00000624313 397 ntBASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms