Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 AC106754.1-201ENST00000562632 1513 ntBASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 SNORA72.3-201ENST00000365074 132 ntBASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 AC007066.1-201ENST00000392902 381 ntBASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 U3.42-201ENST00000408746 214 ntBASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 MTCO2P5-201ENST00000422621 426 ntBASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 AC013410.2-201ENST00000422627 201 ntBASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 AC007742.1-201ENST00000425789 329 ntBASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 MTATP6P4-201ENST00000427725 675 ntBASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 ELOCP26-201ENST00000436067 329 ntBASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 BX510359.1-201ENST00000456973 237 ntBASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 AP001486.1-201ENST00000463339 476 ntBASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 AC023424.2-201ENST00000493479 777 ntBASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 TMEM251P1-201ENST00000503717 318 ntBASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 VN1R104P-201ENST00000505115 1009 ntBASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 SNORA31.1-201ENST00000515993 133 ntBASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 SNORA31.5-201ENST00000516190 133 ntBASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 AC090136.1-201ENST00000520009 240 ntBASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 AL121766.1-201ENST00000547436 487 ntBASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 AC099489.2-201ENST00000574976 260 ntBASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 BNIP3P40-201ENST00000596017 556 ntBASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 AC013444.2-201ENST00000603317 787 ntBASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 DUXAP11-201ENST00000603858 526 ntBASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 MIR6852-201ENST00000621699 66 ntBASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 AC119674.1-207ENST00000641355 633 ntBASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 AC109315.1-201ENST00000584143 1347 ntBASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RPH3AQ9Y2J0 ZNF833P-201ENST00000424938 1494 ntBASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 RNA5SP267-201ENST00000364893 126 ntBASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 SNORD116-12-201ENST00000384468 92 ntBASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 SNORA1.3-201ENST00000384676 136 ntBASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 RNU1-101P-201ENST00000391171 127 ntBASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 AL354719.1-201ENST00000406535 843 ntBASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 RNU6-584P-201ENST00000410350 95 ntBASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 AL449283.1-202ENST00000418249 604 ntBASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 RPS15AP6-201ENST00000420703 385 ntBASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 AL158156.1-201ENST00000422509 473 ntBASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 TRIAP1P1-201ENST00000427062 225 ntBASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 RAC1P7-201ENST00000445367 377 ntBASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 EXOSC3P1-201ENST00000448649 500 ntBASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 AL353691.1-201ENST00000451332 387 ntBASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 FAM60DP-201ENST00000524174 632 ntBASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 OR10V3P-201ENST00000525712 725 ntBASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 AC005832.3-201ENST00000537929 631 ntBASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 OR4T1P-201ENST00000554933 911 ntBASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 AC055876.1-202ENST00000567053 138 ntBASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 VN1R83P-201ENST00000595685 445 ntBASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 AL138478.1-201ENST00000612252 832 ntBASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.35□□□□□ -1.87
RPH3AQ9Y2J0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RPH3AQ9Y2J0 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.34□□□□□ -1.87
RPH3AQ9Y2J0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RPH3AQ9Y2J0 RNA5SP51-201ENST00000364750 119 ntBASIC3.34□□□□□ -1.87
RPH3AQ9Y2J0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RPH3AQ9Y2J0 AL122016.1-201ENST00000403365 367 ntBASIC3.34□□□□□ -1.87
RPH3AQ9Y2J0 HMGB1P17-201ENST00000403495 628 ntBASIC3.34□□□□□ -1.87
RPH3AQ9Y2J0 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
RPH3AQ9Y2J0 HMGB3P20-201ENST00000417997 600 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms