Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.9□□□□□ -1.46
CDK11AQ9UQ88 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
CDK11AQ9UQ88 AC010424.1-201ENST00000506336 297 ntBASIC5.9□□□□□ -1.46
CDK11AQ9UQ88 AC091965.2-201ENST00000512324 613 ntBASIC5.9□□□□□ -1.46
CDK11AQ9UQ88 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CDK11AQ9UQ88 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDK11AQ9UQ88 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.9□□□□□ -1.46
CDK11AQ9UQ88 HSPE1P3-201ENST00000559254 309 ntBASIC5.9□□□□□ -1.46
CDK11AQ9UQ88 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC5.9□□□□□ -1.46
CDK11AQ9UQ88 MIR3200-201ENST00000580767 85 ntBASIC5.9□□□□□ -1.46
CDK11AQ9UQ88 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.9□□□□□ -1.46
CDK11AQ9UQ88 U73023.1-201ENST00000603134 700 ntBASIC5.9□□□□□ -1.46
CDK11AQ9UQ88 AC073968.1-201ENST00000618594 637 ntBASIC5.9□□□□□ -1.46
CDK11AQ9UQ88 AC009318.4-201ENST00000620496 486 ntBASIC5.9□□□□□ -1.46
CDK11AQ9UQ88 AC243312.2-201ENST00000623340 601 ntBASIC5.9□□□□□ -1.46
CDK11AQ9UQ88 AL356596.1-201ENST00000624230 379 ntBASIC5.9□□□□□ -1.46
CDK11AQ9UQ88 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.9□□□□□ -1.46
CDK11AQ9UQ88 AC092192.1-201ENST00000633154 1018 ntBASIC5.9□□□□□ -1.46
CDK11AQ9UQ88 AC244258.1-201ENST00000637553 1071 ntBASIC5.9□□□□□ -1.46
CDK11AQ9UQ88 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
CDK11AQ9UQ88 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 CR383658.2-201ENST00000547576 1525 ntBASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 USP8P1-201ENST00000494673 3183 ntBASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 Y_RNA.194-201ENST00000363985 102 ntBASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 HMGB1P17-201ENST00000403495 628 ntBASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 SNRPEP7-201ENST00000438350 220 ntBASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 AC108941.1-201ENST00000502853 530 ntBASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 MTND5P4-201ENST00000514978 288 ntBASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 AP001004.1-201ENST00000582468 324 ntBASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 AC128687.1-201ENST00000605304 619 ntBASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 ZNF962P-201ENST00000443465 3140 ntBASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 PRO1804-201ENST00000623780 2050 ntBASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC5.89□□□□□ -1.47
CDK11AQ9UQ88 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 EXOC5P1-201ENST00000510543 1969 ntBASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 SNORA51.2-201ENST00000364595 132 ntBASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 SNORA51.6-201ENST00000384151 125 ntBASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 AL024474.1-201ENST00000404655 591 ntBASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 RNU2-37P-201ENST00000410695 177 ntBASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 RNA5SP39-201ENST00000411245 120 ntBASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 AL049610.1-201ENST00000423374 372 ntBASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 AC006548.1-201ENST00000427470 102 ntBASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 CYCSP4-201ENST00000429682 331 ntBASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 AC092641.1-201ENST00000440229 772 ntBASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 MEMO1P3-201ENST00000459811 302 ntBASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 RNU6-150P-201ENST00000516237 95 ntBASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 AP000873.5-201ENST00000533906 236 ntBASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 MIR5195-201ENST00000583555 115 ntBASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 AL160281.1-201ENST00000605307 311 ntBASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 AL031775.1-201ENST00000607014 887 ntBASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 CR381572.1-201ENST00000625098 102 ntBASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 MTCO1P23-201ENST00000415223 1526 ntBASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDK11AQ9UQ88 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.87□□□□□ -1.47
CDK11AQ9UQ88 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.87□□□□□ -1.47
CDK11AQ9UQ88 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.87□□□□□ -1.47
CDK11AQ9UQ88 U3.4-201ENST00000363352 213 ntBASIC5.87□□□□□ -1.47
CDK11AQ9UQ88 RNU6-501P-201ENST00000364072 100 ntBASIC5.87□□□□□ -1.47
CDK11AQ9UQ88 RNVU1-14-201ENST00000384770 164 ntBASIC5.87□□□□□ -1.47
CDK11AQ9UQ88 AL138880.1-201ENST00000405824 642 ntBASIC5.87□□□□□ -1.47
CDK11AQ9UQ88 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.87□□□□□ -1.47
CDK11AQ9UQ88 OFD1P13Y-201ENST00000431179 1232 ntBASIC5.87□□□□□ -1.47
CDK11AQ9UQ88 MRPS18BP2-201ENST00000434310 759 ntBASIC5.87□□□□□ -1.47
CDK11AQ9UQ88 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.87□□□□□ -1.47
CDK11AQ9UQ88 RPL23AP74-201ENST00000437246 471 ntBASIC5.87□□□□□ -1.47
CDK11AQ9UQ88 AL512286.1-201ENST00000439244 400 ntBASIC5.87□□□□□ -1.47
CDK11AQ9UQ88 ATP5C1P1-201ENST00000441945 895 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms