Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC108479.2-201ENST00000617314 601 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AC009248.2-201ENST00000619826 254 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AC006504.8-201ENST00000621046 635 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 U6.105-201ENST00000637379 88 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 MFSD8-242ENST00000641690 4199 ntBASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 AC007342.7-201ENST00000624610 2337 ntBASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 RNU6-660P-201ENST00000364566 109 ntBASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 RNU6-1318P-201ENST00000365389 103 ntBASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 RNU6-463P-201ENST00000384340 107 ntBASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 Y_RNA.605-201ENST00000410577 105 ntBASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 OR1AA1P-201ENST00000419597 916 ntBASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 SETP9-201ENST00000423837 832 ntBASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 AL035410.1-201ENST00000427409 427 ntBASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 AC236972.2-201ENST00000434979 310 ntBASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 AC016691.1-201ENST00000441321 413 ntBASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 RPS4XP12-201ENST00000461747 709 ntBASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 AC007182.2-201ENST00000489251 402 ntBASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 HMGB1P29-201ENST00000505659 499 ntBASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 SOD1P3-201ENST00000518682 454 ntBASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 AC110743.1-201ENST00000584870 478 ntBASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 AC006116.10-201ENST00000591836 581 ntBASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 AC015922.4-201ENST00000612568 690 ntBASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 STMN1P1-201ENST00000617809 440 ntBASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 AP001642.1-201ENST00000624727 2117 ntBASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 MARK2P15-201ENST00000432204 2186 ntBASIC3.12□□□□□ -1.91
NOTCH3Q9UM47 Y_RNA.166-201ENST00000363730 102 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 SNORA63C-201ENST00000364578 129 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 RNU6-784P-201ENST00000384330 106 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 RNU6-1122P-201ENST00000384449 107 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 RNU6-297P-201ENST00000384636 107 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 SNORD65.1-201ENST00000390889 71 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 RNU4-55P-201ENST00000410731 137 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 RAB9AP3-201ENST00000412737 573 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 BRK1P2-201ENST00000442875 223 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 RAB9AP1-201ENST00000449393 573 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AL136126.1-201ENST00000473603 402 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 RPS29P2-201ENST00000479278 136 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC112184.1-201ENST00000505179 312 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AL390334.1-201ENST00000556395 450 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 MIR4666A-201ENST00000580160 79 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC090312.1-201ENST00000580637 348 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC100830.2-201ENST00000581636 240 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 NRBF2P1-201ENST00000587407 859 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC011712.1-201ENST00000588959 234 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AP001542.2-201ENST00000593141 364 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC245014.2-201ENST00000603689 287 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC007621.1-201ENST00000604544 437 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC007363.1-201ENST00000604736 620 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC246785.4-201ENST00000605374 287 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms