Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC103975.1-201ENST00000482506 483 ntBASIC3.33□□□□□ -1.88
RIMBP3Q9UFD9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
RIMBP3Q9UFD9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.33□□□□□ -1.88
RIMBP3Q9UFD9 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RIMBP3Q9UFD9 RNU2-6P-201ENST00000411404 190 ntBASIC3.33□□□□□ -1.88
RIMBP3Q9UFD9 HMGB1P11-201ENST00000413899 637 ntBASIC3.33□□□□□ -1.88
RIMBP3Q9UFD9 AL445685.2-201ENST00000422551 342 ntBASIC3.33□□□□□ -1.88
RIMBP3Q9UFD9 RWDD4P2-201ENST00000426392 563 ntBASIC3.33□□□□□ -1.88
RIMBP3Q9UFD9 TOMM22P6-201ENST00000465035 409 ntBASIC3.33□□□□□ -1.88
RIMBP3Q9UFD9 RPL21P71-201ENST00000465598 459 ntBASIC3.33□□□□□ -1.88
RIMBP3Q9UFD9 RWDD4P1-201ENST00000488019 565 ntBASIC3.33□□□□□ -1.88
RIMBP3Q9UFD9 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
RIMBP3Q9UFD9 RNA5SP182-201ENST00000516064 82 ntBASIC3.33□□□□□ -1.88
RIMBP3Q9UFD9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.33□□□□□ -1.88
RIMBP3Q9UFD9 AL121839.1-201ENST00000556233 1185 ntBASIC3.33□□□□□ -1.88
RIMBP3Q9UFD9 AC105036.1-201ENST00000566222 271 ntBASIC3.33□□□□□ -1.88
RIMBP3Q9UFD9 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.33□□□□□ -1.88
RIMBP3Q9UFD9 AC019159.1-201ENST00000605094 187 ntBASIC3.33□□□□□ -1.88
RIMBP3Q9UFD9 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
RIMBP3Q9UFD9 AC066616.2-201ENST00000559334 1481 ntBASIC3.32□□□□□ -1.88
RIMBP3Q9UFD9 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RIMBP3Q9UFD9 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.32□□□□□ -1.88
RIMBP3Q9UFD9 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RIMBP3Q9UFD9 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
RIMBP3Q9UFD9 FRG1BP-201ENST00000278882 761 ntBASIC3.32□□□□□ -1.88
RIMBP3Q9UFD9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RIMBP3Q9UFD9 SNORA67.5-201ENST00000391036 107 ntBASIC3.32□□□□□ -1.88
RIMBP3Q9UFD9 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RIMBP3Q9UFD9 MTND4LP21-201ENST00000415303 295 ntBASIC3.32□□□□□ -1.88
RIMBP3Q9UFD9 POU5F1P7-201ENST00000508759 541 ntBASIC3.32□□□□□ -1.88
RIMBP3Q9UFD9 AMZ2P1-203ENST00000565833 850 ntBASIC3.32□□□□□ -1.88
RIMBP3Q9UFD9 AL135786.2-201ENST00000608422 615 ntBASIC3.32□□□□□ -1.88
RIMBP3Q9UFD9 AC025048.6-202ENST00000627667 438 ntBASIC3.32□□□□□ -1.88
RIMBP3Q9UFD9 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RIMBP3Q9UFD9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RIMBP3Q9UFD9 AC090229.1-201ENST00000590983 1609 ntBASIC3.32□□□□□ -1.88
RIMBP3Q9UFD9 AC091152.2-201ENST00000591628 2569 ntBASIC3.32□□□□□ -1.88
RIMBP3Q9UFD9 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RIMBP3Q9UFD9 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.31□□□□□ -1.88
RIMBP3Q9UFD9 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RIMBP3Q9UFD9 AL606490.7-201ENST00000433136 191 ntBASIC3.31□□□□□ -1.88
RIMBP3Q9UFD9 RPS29P12-201ENST00000460178 152 ntBASIC3.31□□□□□ -1.88
RIMBP3Q9UFD9 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.31□□□□□ -1.88
RIMBP3Q9UFD9 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.31□□□□□ -1.88
RIMBP3Q9UFD9 AC007620.3-201ENST00000608131 497 ntBASIC3.31□□□□□ -1.88
RIMBP3Q9UFD9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RIMBP3Q9UFD9 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RIMBP3Q9UFD9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.31□□□□□ -1.88
RIMBP3Q9UFD9 AC008173.1-201ENST00000418901 264 ntBASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 CACYBPP1-201ENST00000438592 684 ntBASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 AC092155.2-201ENST00000454675 477 ntBASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 RPL9P33-201ENST00000484311 566 ntBASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 OR4H12P-201ENST00000556269 907 ntBASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 AL845331.3-202ENST00000562856 261 ntBASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 PSMA6P4-201ENST00000603247 718 ntBASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 AL450489.1-201ENST00000612071 468 ntBASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 MIR6734-201ENST00000621166 68 ntBASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 AC244517.12-201ENST00000623581 663 ntBASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 AL160394.1-201ENST00000624765 724 ntBASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 AC093591.3-201ENST00000634516 308 ntBASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 API5P2-201ENST00000397055 1498 ntBASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 MIR9-3-201ENST00000385084 90 ntBASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 RNA5SP220-201ENST00000516298 104 ntBASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 AC069234.5-201ENST00000611056 416 ntBASIC3.3□□□□□ -1.88
RIMBP3Q9UFD9 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RIMBP3Q9UFD9 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.29□□□□□ -1.88
RIMBP3Q9UFD9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
RIMBP3Q9UFD9 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
RIMBP3Q9UFD9 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
RIMBP3Q9UFD9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.29□□□□□ -1.88
RIMBP3Q9UFD9 Y_RNA.354-201ENST00000365448 111 ntBASIC3.29□□□□□ -1.88
RIMBP3Q9UFD9 MTCO3P31-201ENST00000405526 789 ntBASIC3.29□□□□□ -1.88
RIMBP3Q9UFD9 AL358453.1-201ENST00000422522 250 ntBASIC3.29□□□□□ -1.88
RIMBP3Q9UFD9 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.29□□□□□ -1.88
RIMBP3Q9UFD9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.29□□□□□ -1.88
RIMBP3Q9UFD9 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.29□□□□□ -1.88
RIMBP3Q9UFD9 OR4P1P-201ENST00000530808 1136 ntBASIC3.29□□□□□ -1.88
RIMBP3Q9UFD9 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.29□□□□□ -1.88
RIMBP3Q9UFD9 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.29□□□□□ -1.88
RIMBP3Q9UFD9 AC067852.7-201ENST00000623270 535 ntBASIC3.29□□□□□ -1.88
RIMBP3Q9UFD9 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.29□□□□□ -1.88
RIMBP3Q9UFD9 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RIMBP3Q9UFD9 CUL4AP1-201ENST00000514750 1863 ntBASIC3.29□□□□□ -1.88
RIMBP3Q9UFD9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RIMBP3Q9UFD9 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RIMBP3Q9UFD9 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RIMBP3Q9UFD9 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RIMBP3Q9UFD9 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.28□□□□□ -1.88
RIMBP3Q9UFD9 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms