Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.23□□□□□ -1.57
VTI1BQ9UEU0 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
VTI1BQ9UEU0 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.23□□□□□ -1.57
VTI1BQ9UEU0 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
VTI1BQ9UEU0 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VTI1BQ9UEU0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.23□□□□□ -1.57
VTI1BQ9UEU0 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
VTI1BQ9UEU0 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.23□□□□□ -1.57
VTI1BQ9UEU0 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.23□□□□□ -1.57
VTI1BQ9UEU0 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VTI1BQ9UEU0 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 AC023421.1-201ENST00000590535 1785 ntBASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 SAMMSON-226ENST00000642089 1582 ntBASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 MIR323A-201ENST00000362199 86 ntBASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 Y_RNA.387-201ENST00000383918 102 ntBASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 RNU6-629P-201ENST00000384061 103 ntBASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 RN7SKP206-201ENST00000410823 293 ntBASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 AL591848.1-201ENST00000413092 322 ntBASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 AC104333.2-201ENST00000422630 192 ntBASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 Y_RNA.632-201ENST00000459189 102 ntBASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 RN7SL814P-201ENST00000487715 300 ntBASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 AC110792.1-201ENST00000491826 472 ntBASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 RN7SL466P-201ENST00000497546 295 ntBASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 AL442663.2-201ENST00000554385 511 ntBASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 AC011445.2-201ENST00000599274 173 ntBASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 AC104695.2-201ENST00000605056 775 ntBASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 AL158032.1-201ENST00000605401 106 ntBASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 Z82243.1-201ENST00000609432 473 ntBASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 AC009570.1-201ENST00000609599 745 ntBASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 uc_338.15-201ENST00000615470 191 ntBASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VTI1BQ9UEU0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.21□□□□□ -1.57
VTI1BQ9UEU0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
VTI1BQ9UEU0 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
VTI1BQ9UEU0 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
VTI1BQ9UEU0 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 SNORD113-7-201ENST00000363762 77 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 RNU6-335P-201ENST00000364563 113 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 RNA5SP235-201ENST00000365411 114 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 RNU6-1227P-201ENST00000383981 107 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 Y_RNA.419-201ENST00000384041 102 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 RNU6-14P-201ENST00000384630 106 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 MIR143-201ENST00000385300 106 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 RNU6-817P-201ENST00000391083 104 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 CHEK2P5-201ENST00000423877 246 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 AC079780.1-201ENST00000428259 207 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 NDUFA5P4-201ENST00000436704 385 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 GAPDHP58-201ENST00000438477 1006 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 AL391987.1-201ENST00000441025 200 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 HMGB3P9-201ENST00000441799 583 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 AC079168.1-201ENST00000458741 345 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 RPL21P93-201ENST00000480465 489 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 VN1R104P-201ENST00000505115 1009 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 KLHL2P1-201ENST00000508691 521 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 GMPSP1-201ENST00000514075 579 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 SNORA31.3-201ENST00000516029 96 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 RNU6-189P-201ENST00000516120 101 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 HMGB1P19-201ENST00000517578 577 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 AP006245.2-201ENST00000522004 300 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 AP000889.2-201ENST00000532684 490 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 AC015720.2-201ENST00000567709 334 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 AC106782.4-201ENST00000568264 210 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 AC005951.2-201ENST00000576282 495 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 SNORD95-201ENST00000579879 68 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms