Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC091167.1-201ENST00000492017 396 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.04□□□□□ -1.76
LRFN1Q9P244 FTH1P21-201ENST00000512179 511 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.04□□□□□ -1.76
LRFN1Q9P244 MTND3P5-201ENST00000512798 333 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.04□□□□□ -1.76
LRFN1Q9P244 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.04□□□□□ -1.76
LRFN1Q9P244 IGKV2D-19-201ENST00000523346 262 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.04□□□□□ -1.76
LRFN1Q9P244 AP002453.2-201ENST00000533503 320 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.04□□□□□ -1.76
LRFN1Q9P244 MED28P6-201ENST00000558776 231 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.04□□□□□ -1.76
LRFN1Q9P244 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.04□□□□□ -1.76
LRFN1Q9P244 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.04□□□□□ -1.76
LRFN1Q9P244 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.04□□□□□ -1.76
LRFN1Q9P244 HMGN1P30-201ENST00000589286 268 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 BNIP3P22-201ENST00000593399 556 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.04□□□□□ -1.76
LRFN1Q9P244 AC068790.2-201ENST00000602601 557 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 SEPT7P9-203ENST00000604116 343 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 AP001330.4-201ENST00000604350 154 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 MIR92B-201ENST00000607575 96 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 AL391813.2-201ENST00000609113 322 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.04□□□□□ -1.76
LRFN1Q9P244 AC008121.2-201ENST00000614647 523 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 AP001506.1-201ENST00000615444 211 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 SNX18P1Y-201ENST00000616231 511 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.04□□□□□ -1.76
LRFN1Q9P244 MIR6891-201ENST00000618788 93 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 AL445567.2-201ENST00000618935 498 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.04□□□□□ -1.76
LRFN1Q9P244 AC092656.1-203ENST00000624134 423 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 MIR3653-201ENST00000625572 110 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
LRFN1Q9P244 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRFN1Q9P244 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LRFN1Q9P244 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
LRFN1Q9P244 AC005832.2-201ENST00000538921 1430 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
LRFN1Q9P244 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.04□□□□□ -1.76
LRFN1Q9P244 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.03□□□□□ -1.76
LRFN1Q9P244 GABPAP-201ENST00000419271 1356 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.03□□□□□ -1.76
LRFN1Q9P244 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.03□□□□□ -1.76
LRFN1Q9P244 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LRFN1Q9P244 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.03□□□□□ -1.76
LRFN1Q9P244 AC067945.1-201ENST00000342609 618 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 RNU1-64P-201ENST00000365443 163 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
LRFN1Q9P244 AL359837.1-201ENST00000381357 287 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 SNORD116-4-201ENST00000384733 96 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 MIR134-201ENST00000385258 73 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 MIR921-201ENST00000401133 56 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 RPL23AP48-201ENST00000406913 488 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LRFN1Q9P244 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.03□□□□□ -1.76
LRFN1Q9P244 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.03□□□□□ -1.76
LRFN1Q9P244 TIMM9P1-201ENST00000436122 256 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.03□□□□□ -1.76
LRFN1Q9P244 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.03□□□□□ -1.76
LRFN1Q9P244 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.03□□□□□ -1.76
LRFN1Q9P244 AC108059.3-201ENST00000456388 214 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 OR9M1P-201ENST00000459641 921 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 AC010469.1-201ENST00000463864 576 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LRFN1Q9P244 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.03□□□□□ -1.76
LRFN1Q9P244 DEFB109F-201ENST00000491870 277 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 NIPA2P2-201ENST00000496376 1083 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LRFN1Q9P244 VN1R104P-201ENST00000505115 1009 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.03□□□□□ -1.76
LRFN1Q9P244 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.03□□□□□ -1.76
LRFN1Q9P244 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LRFN1Q9P244 MRPL49P2-201ENST00000521066 465 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 CYCSP29-201ENST00000533731 318 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 CCNG2P1-201ENST00000549521 1000 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.03□□□□□ -1.76
LRFN1Q9P244 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.03□□□□□ -1.76
LRFN1Q9P244 MIR3118-1-201ENST00000581787 76 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.03□□□□□ -1.76
LRFN1Q9P244 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.03□□□□□ -1.76
LRFN1Q9P244 AC008759.1-201ENST00000589783 983 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 CKS1BP3-201ENST00000600888 237 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 KC877982.1-201ENST00000602313 470 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 AC004067.1-201ENST00000608733 700 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 AC090970.3-201ENST00000612566 866 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 AC100793.4-201ENST00000613683 429 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 AL603758.1-201ENST00000618654 241 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 AL139089.1-201ENST00000620372 975 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 AC091953.2-201ENST00000623979 160 ntBASIC4.03□□□□□ -1.76
LRFN1Q9P244 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.03□□□□□ -1.76
LRFN1Q9P244 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.03□□□□□ -1.76
LRFN1Q9P244 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
LRFN1Q9P244 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
LRFN1Q9P244 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
LRFN1Q9P244 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
LRFN1Q9P244 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LRFN1Q9P244 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LRFN1Q9P244 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms