Protein–RNA interactions for Protein: Q9P1Z9

CCDC180, Coiled-coil domain-containing protein 180, humanhuman

Predictions only

Length 1,646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180Q9P1Z9 RN7SKP96-201ENST00000516948 297 ntBASIC4.03□□□□□ -1.76
CCDC180Q9P1Z9 snoZ278.1-201ENST00000517059 112 ntBASIC4.03□□□□□ -1.76
CCDC180Q9P1Z9 AC104986.1-201ENST00000517978 436 ntBASIC4.03□□□□□ -1.76
CCDC180Q9P1Z9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC4.03□□□□□ -1.76
CCDC180Q9P1Z9 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC180Q9P1Z9 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
CCDC180Q9P1Z9 AC084768.2-201ENST00000622736 221 ntBASIC4.03□□□□□ -1.76
CCDC180Q9P1Z9 AP001148.1-201ENST00000624124 2359 ntBASIC4.03□□□□□ -1.76
CCDC180Q9P1Z9 AP001486.2-201ENST00000561652 5113 ntBASIC4.03□□□□□ -1.76
CCDC180Q9P1Z9 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC180Q9P1Z9 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.03□□□□□ -1.76
CCDC180Q9P1Z9 Y_RNA.269-201ENST00000364685 89 ntBASIC4.03□□□□□ -1.77
CCDC180Q9P1Z9 SNORA67.5-201ENST00000391036 107 ntBASIC4.03□□□□□ -1.77
CCDC180Q9P1Z9 SAR1AP2-201ENST00000392696 594 ntBASIC4.03□□□□□ -1.77
CCDC180Q9P1Z9 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.03□□□□□ -1.77
CCDC180Q9P1Z9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.03□□□□□ -1.77
CCDC180Q9P1Z9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC180Q9P1Z9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CCDC180Q9P1Z9 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
CCDC180Q9P1Z9 SNORA40.18-201ENST00000391200 128 ntBASIC4.02□□□□□ -1.77
CCDC180Q9P1Z9 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC180Q9P1Z9 AC073310.1-201ENST00000423226 1033 ntBASIC4.02□□□□□ -1.77
CCDC180Q9P1Z9 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC180Q9P1Z9 AC009237.8-201ENST00000445492 379 ntBASIC4.02□□□□□ -1.77
CCDC180Q9P1Z9 TBCAP3-201ENST00000512475 312 ntBASIC4.02□□□□□ -1.77
CCDC180Q9P1Z9 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC180Q9P1Z9 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC180Q9P1Z9 CR769767.1-201ENST00000436337 346 ntBASIC4.01□□□□□ -1.77
CCDC180Q9P1Z9 MTND5P4-201ENST00000514978 288 ntBASIC4.01□□□□□ -1.77
CCDC180Q9P1Z9 SNORA31.26-201ENST00000517250 137 ntBASIC4.01□□□□□ -1.77
CCDC180Q9P1Z9 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC180Q9P1Z9 AC048347.1-201ENST00000624621 427 ntBASIC4.01□□□□□ -1.77
CCDC180Q9P1Z9 AC093909.5-201ENST00000621839 1799 ntBASIC4.01□□□□□ -1.77
CCDC180Q9P1Z9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC180Q9P1Z9 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
CCDC180Q9P1Z9 Y_RNA.540-201ENST00000384638 111 ntBASIC4□□□□□ -1.77
CCDC180Q9P1Z9 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4□□□□□ -1.77
CCDC180Q9P1Z9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4□□□□□ -1.77
CCDC180Q9P1Z9 AP000275.1-201ENST00000411943 390 ntBASIC4□□□□□ -1.77
CCDC180Q9P1Z9 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4□□□□□ -1.77
CCDC180Q9P1Z9 SUB1P3-201ENST00000564581 315 ntBASIC4□□□□□ -1.77
CCDC180Q9P1Z9 MIR4303-201ENST00000581299 66 ntBASIC4□□□□□ -1.77
CCDC180Q9P1Z9 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4□□□□□ -1.77
CCDC180Q9P1Z9 ABI1P1-201ENST00000603375 1120 ntBASIC4□□□□□ -1.77
CCDC180Q9P1Z9 Y_RNA.783-201ENST00000613546 102 ntBASIC4□□□□□ -1.77
CCDC180Q9P1Z9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC180Q9P1Z9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC180Q9P1Z9 RNU6-178P-201ENST00000384631 104 ntBASIC3.99□□□□□ -1.77
CCDC180Q9P1Z9 AL606537.1-201ENST00000607258 2011 ntBASIC3.99□□□□□ -1.77
CCDC180Q9P1Z9 MTND5P23-201ENST00000430812 1655 ntBASIC3.99□□□□□ -1.77
CCDC180Q9P1Z9 Y_RNA.116-201ENST00000363292 103 ntBASIC3.99□□□□□ -1.77
CCDC180Q9P1Z9 RAD23BP2-201ENST00000416003 1207 ntBASIC3.99□□□□□ -1.77
CCDC180Q9P1Z9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC180Q9P1Z9 AC011753.1-201ENST00000451001 220 ntBASIC3.99□□□□□ -1.77
CCDC180Q9P1Z9 AC087190.1-201ENST00000484462 480 ntBASIC3.99□□□□□ -1.77
CCDC180Q9P1Z9 AC005840.1-201ENST00000498412 377 ntBASIC3.99□□□□□ -1.77
CCDC180Q9P1Z9 HMGB1P1-201ENST00000522557 636 ntBASIC3.99□□□□□ -1.77
CCDC180Q9P1Z9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC180Q9P1Z9 BTF3P4-201ENST00000418852 495 ntBASIC3.98□□□□□ -1.77
CCDC180Q9P1Z9 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC180Q9P1Z9 AP000852.1-201ENST00000472460 573 ntBASIC3.98□□□□□ -1.77
CCDC180Q9P1Z9 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC180Q9P1Z9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC180Q9P1Z9 AC000367.1-201ENST00000452711 1766 ntBASIC3.97□□□□□ -1.77
CCDC180Q9P1Z9 MIR499A-201ENST00000384903 122 ntBASIC3.97□□□□□ -1.77
CCDC180Q9P1Z9 MIR518E-201ENST00000385252 88 ntBASIC3.97□□□□□ -1.77
CCDC180Q9P1Z9 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC180Q9P1Z9 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC180Q9P1Z9 AC060766.3-201ENST00000591442 263 ntBASIC3.97□□□□□ -1.77
CCDC180Q9P1Z9 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.97□□□□□ -1.77
CCDC180Q9P1Z9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.97□□□□□ -1.77
CCDC180Q9P1Z9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC180Q9P1Z9 API5P2-201ENST00000397055 1498 ntBASIC3.97□□□□□ -1.77
CCDC180Q9P1Z9 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CCDC180Q9P1Z9 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC180Q9P1Z9 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC180Q9P1Z9 RNA5SP402-201ENST00000517148 110 ntBASIC3.96□□□□□ -1.78
CCDC180Q9P1Z9 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
CCDC180Q9P1Z9 AP000889.2-201ENST00000532684 490 ntBASIC3.96□□□□□ -1.78
CCDC180Q9P1Z9 RPS3AP4-201ENST00000555161 764 ntBASIC3.96□□□□□ -1.78
CCDC180Q9P1Z9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC180Q9P1Z9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
CCDC180Q9P1Z9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC180Q9P1Z9 AC004520.1-201ENST00000608362 1413 ntBASIC3.96□□□□□ -1.78
CCDC180Q9P1Z9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CCDC180Q9P1Z9 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC180Q9P1Z9 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC180Q9P1Z9 AL021407.1-201ENST00000404531 386 ntBASIC3.95□□□□□ -1.78
CCDC180Q9P1Z9 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC180Q9P1Z9 MTCO3P30-201ENST00000426425 670 ntBASIC3.95□□□□□ -1.78
CCDC180Q9P1Z9 RPL23AP63-201ENST00000498752 471 ntBASIC3.95□□□□□ -1.78
CCDC180Q9P1Z9 RNU6-250P-201ENST00000516958 103 ntBASIC3.95□□□□□ -1.78
CCDC180Q9P1Z9 AC068790.3-201ENST00000602988 553 ntBASIC3.95□□□□□ -1.78
CCDC180Q9P1Z9 AL356575.1-201ENST00000603008 283 ntBASIC3.95□□□□□ -1.78
CCDC180Q9P1Z9 AC091046.2-201ENST00000620775 665 ntBASIC3.95□□□□□ -1.78
CCDC180Q9P1Z9 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.95□□□□□ -1.78
CCDC180Q9P1Z9 ZNF271P-202ENST00000465539 1970 ntBASIC3.95□□□□□ -1.78
CCDC180Q9P1Z9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
CCDC180Q9P1Z9 SNORA51.11-201ENST00000384442 131 ntBASIC3.95□□□□□ -1.78
CCDC180Q9P1Z9 FGF7P8-201ENST00000402994 292 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms