Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 RNU6-777P-201ENST00000364265 104 ntBASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 RNA5SP167-201ENST00000365461 116 ntBASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 AC016769.3-201ENST00000396562 315 ntBASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 Y_RNA.619-201ENST00000410951 90 ntBASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 HMGB1P11-201ENST00000413899 637 ntBASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 CDK8P2-201ENST00000415020 547 ntBASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 AC083875.1-201ENST00000419509 405 ntBASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 OR4F13P-201ENST00000428478 931 ntBASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 AL158071.1-201ENST00000430315 461 ntBASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 MUPP-201ENST00000438111 566 ntBASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 ANP32BP2-201ENST00000454525 545 ntBASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 AC099563.1-201ENST00000456086 418 ntBASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 RPL9P32-201ENST00000464118 620 ntBASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 AC022034.3-201ENST00000471393 478 ntBASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 VN1R105P-201ENST00000486595 910 ntBASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 AC093267.1-201ENST00000489176 961 ntBASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 AC005726.1-201ENST00000494679 427 ntBASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 RN7SL323P-201ENST00000494712 295 ntBASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 TMEM251P1-201ENST00000503717 318 ntBASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 NDUFB4P9-201ENST00000511646 388 ntBASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 RNU6-1231P-201ENST00000517185 103 ntBASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 IGKV2D-23-201ENST00000518179 286 ntBASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 MIR4637-201ENST00000582405 84 ntBASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 AL392088.2-201ENST00000637607 285 ntBASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.81□□□□□ -1.8
SMARCAL1Q9NZC9 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 GDI2P1-201ENST00000429312 1336 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 SNORA51.6-201ENST00000384151 125 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 RNU6-1119P-201ENST00000384349 108 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 DHFRP6-201ENST00000401776 268 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 AL023807.1-201ENST00000407932 359 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 RN7SKP263-201ENST00000411194 309 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 AL663109.1-201ENST00000411498 844 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 AC109780.2-201ENST00000413467 845 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 AC004022.2-201ENST00000413824 193 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 AC017079.2-201ENST00000416102 485 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 AL139247.1-201ENST00000422768 325 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 AC096632.1-201ENST00000427395 310 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 RPL7P2-201ENST00000427639 268 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 MTND1P28-201ENST00000435623 950 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 LSM1P1-201ENST00000438629 273 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 MTND1P27-201ENST00000451117 902 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 CFTRP1-201ENST00000456646 183 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 HMGB3P30-201ENST00000457863 606 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 RNU7-136P-201ENST00000458819 69 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 AL136126.1-201ENST00000473603 402 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 AC110792.2-201ENST00000510278 224 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 ARL2BPP6-201ENST00000512757 439 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 MTND5P4-201ENST00000514978 288 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 RN7SKP21-201ENST00000516503 220 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 AC104986.1-201ENST00000517978 436 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 ZNF705CP-201ENST00000530515 889 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 LSM6P2-201ENST00000552208 177 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 AC080078.2-201ENST00000603766 501 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 AC092354.2-201ENST00000607786 514 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 AC100793.4-201ENST00000613683 429 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 AL731566.2-201ENST00000618971 317 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 AC068831.8-201ENST00000620171 435 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms