Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.33□□□□□ -1.88
NDE1Q9NXR1 CYCSP2-201ENST00000558168 301 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.33□□□□□ -1.88
NDE1Q9NXR1 KPNA2P3-201ENST00000584190 848 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 PIGPP4-201ENST00000584447 307 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 AC004223.2-201ENST00000590309 544 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 AL591034.3-201ENST00000605511 685 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 AC245008.1-201ENST00000608123 476 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 AC024560.3-201ENST00000608482 349 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 AL031667.3-201ENST00000620124 655 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 U6.101-201ENST00000637707 76 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 ZNF37BP-203ENST00000452306 1352 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 AP002907.1-201ENST00000606361 1430 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
NDE1Q9NXR1 AC032011.1-201ENST00000611703 1549 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.33□□□□□ -1.88
NDE1Q9NXR1 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.33□□□□□ -1.88
NDE1Q9NXR1 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 RNU6-660P-201ENST00000364566 109 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 RNA5SP479-201ENST00000364858 117 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 SNORA51.6-201ENST00000384151 125 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 SNORA70E-201ENST00000384492 135 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 RNU6-920P-201ENST00000410926 92 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AL139247.1-201ENST00000422768 325 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AC012498.1-201ENST00000424037 437 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AL590103.1-201ENST00000434488 307 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 HMGB3P11-201ENST00000440127 604 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AC118469.1-201ENST00000442943 488 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 MTND2P19-201ENST00000449129 1012 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 RPS15AP17-201ENST00000470598 390 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 TMEM251P1-201ENST00000503717 318 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 SLC25A15P5-201ENST00000508033 253 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AC005178.1-201ENST00000508392 440 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AC026412.2-201ENST00000512270 1075 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AC104057.1-201ENST00000515547 497 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 RNU6-678P-201ENST00000516832 109 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AC074029.1-201ENST00000552531 1044 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AC010928.3-201ENST00000587712 541 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 BNIP3P11-201ENST00000603878 563 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AC025588.3-201ENST00000604182 274 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AL590392.1-201ENST00000604960 446 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 RNU1-30P-201ENST00000606575 163 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AC090425.2-201ENST00000608818 501 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 MLECP1-201ENST00000615893 709 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AC112200.1-201ENST00000625015 234 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 MIR492-201ENST00000638676 116 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 FAM157B-203ENST00000639350 358 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 AL157700.1-201ENST00000561973 1432 ntBASIC3.32□□□□□ -1.88
NDE1Q9NXR1 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NDE1Q9NXR1 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NDE1Q9NXR1 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NDE1Q9NXR1 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.31□□□□□ -1.88
NDE1Q9NXR1 AC011477.1-204ENST00000623416 1325 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 Y_RNA.18-201ENST00000362461 102 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 Y_RNA.126-201ENST00000363382 111 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NDE1Q9NXR1 DHFRP6-201ENST00000401776 268 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 AL022722.2-201ENST00000402519 180 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 BTBD10P2-201ENST00000404779 676 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 RPL32P35-201ENST00000415214 394 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 SDCBPP3-201ENST00000419629 891 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.31□□□□□ -1.88
NDE1Q9NXR1 AL953862.1-201ENST00000423016 168 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 TRIAP1P1-201ENST00000427062 225 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.31□□□□□ -1.88
NDE1Q9NXR1 OR51AB1P-201ENST00000429046 620 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.31□□□□□ -1.88
NDE1Q9NXR1 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NDE1Q9NXR1 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.31□□□□□ -1.88
NDE1Q9NXR1 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 186.1 ms