Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 BNIP3P5-201ENST00000562290 498 ntBASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AL031985.2-201ENST00000600955 480 ntBASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AC106791.2-201ENST00000604680 391 ntBASIC2.68□□□□□ -1.98
CLN6Q9NWW5 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AC107308.1-201ENST00000615897 301 ntBASIC2.68□□□□□ -1.98
CLN6Q9NWW5 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AC011460.1-201ENST00000636268 1834 ntBASIC2.68□□□□□ -1.98
CLN6Q9NWW5 ASNSP3-201ENST00000451989 1306 ntBASIC2.68□□□□□ -1.98
CLN6Q9NWW5 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CLN6Q9NWW5 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
CLN6Q9NWW5 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.67□□□□□ -1.98
CLN6Q9NWW5 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CLN6Q9NWW5 RNU6-878P-201ENST00000384578 110 ntBASIC2.67□□□□□ -1.98
CLN6Q9NWW5 MIR181A2-201ENST00000384863 110 ntBASIC2.67□□□□□ -1.98
CLN6Q9NWW5 ARF4P3-201ENST00000397387 509 ntBASIC2.67□□□□□ -1.98
CLN6Q9NWW5 RNU4-47P-201ENST00000410876 114 ntBASIC2.67□□□□□ -1.98
CLN6Q9NWW5 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.67□□□□□ -1.98
CLN6Q9NWW5 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.67□□□□□ -1.98
CLN6Q9NWW5 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.67□□□□□ -1.98
CLN6Q9NWW5 CDC27P1-201ENST00000445384 715 ntBASIC2.67□□□□□ -1.98
CLN6Q9NWW5 RPL39P40-201ENST00000445481 146 ntBASIC2.67□□□□□ -1.98
CLN6Q9NWW5 COX6CP18-201ENST00000448769 222 ntBASIC2.67□□□□□ -1.98
CLN6Q9NWW5 CYCSP35-201ENST00000451978 304 ntBASIC2.67□□□□□ -1.98
CLN6Q9NWW5 RFC5P1-201ENST00000454419 874 ntBASIC2.67□□□□□ -1.98
CLN6Q9NWW5 RN7SL542P-201ENST00000467147 294 ntBASIC2.67□□□□□ -1.98
CLN6Q9NWW5 RNU6-56P-201ENST00000516986 93 ntBASIC2.67□□□□□ -1.98
CLN6Q9NWW5 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.67□□□□□ -1.98
CLN6Q9NWW5 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CLN6Q9NWW5 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.67□□□□□ -1.98
CLN6Q9NWW5 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.67□□□□□ -1.98
CLN6Q9NWW5 ELOCP31-201ENST00000540463 467 ntBASIC2.67□□□□□ -1.98
CLN6Q9NWW5 AC107016.2-201ENST00000547968 190 ntBASIC2.67□□□□□ -1.98
CLN6Q9NWW5 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.67□□□□□ -1.98
CLN6Q9NWW5 DNAJC8P1-201ENST00000554535 372 ntBASIC2.67□□□□□ -1.98
CLN6Q9NWW5 AL022099.1-201ENST00000604551 712 ntBASIC2.67□□□□□ -1.98
CLN6Q9NWW5 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.67□□□□□ -1.98
CLN6Q9NWW5 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.67□□□□□ -1.98
CLN6Q9NWW5 AL138880.2-201ENST00000616214 239 ntBASIC2.67□□□□□ -1.98
CLN6Q9NWW5 AL356863.1-201ENST00000623378 1080 ntBASIC2.67□□□□□ -1.98
CLN6Q9NWW5 AC018692.3-201ENST00000623929 123 ntBASIC2.67□□□□□ -1.98
CLN6Q9NWW5 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CLN6Q9NWW5 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
CLN6Q9NWW5 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.67□□□□□ -1.98
CLN6Q9NWW5 Z82195.2-201ENST00000612348 18351 ntBASIC2.67□□□□□ -1.98
CLN6Q9NWW5 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CLN6Q9NWW5 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CLN6Q9NWW5 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.66□□□□□ -1.98
CLN6Q9NWW5 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CLN6Q9NWW5 MIR22-201ENST00000362190 85 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 RNU6-1155P-201ENST00000363554 107 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CLN6Q9NWW5 SNORA1.3-201ENST00000384676 136 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 MIR512-1-201ENST00000384913 84 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.66□□□□□ -1.98
CLN6Q9NWW5 RPL36AP36-201ENST00000418616 301 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 AC027644.1-201ENST00000419595 298 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 TMEM167AP1-201ENST00000423409 219 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 AC104332.2-201ENST00000429959 156 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 SETP8-201ENST00000435341 628 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 RPL23AP58-201ENST00000440453 469 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 Z95327.1-201ENST00000446082 482 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 OR6K5P-201ENST00000447050 945 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.66□□□□□ -1.98
CLN6Q9NWW5 AL590664.1-201ENST00000448065 339 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 AL162389.1-201ENST00000449233 177 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.66□□□□□ -1.98
CLN6Q9NWW5 Z82190.1-201ENST00000454534 490 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.66□□□□□ -1.98
CLN6Q9NWW5 RN7SL499P-201ENST00000481141 276 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 RN7SL293P-201ENST00000481765 281 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.66□□□□□ -1.98
CLN6Q9NWW5 KLRA1P-201ENST00000503499 986 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.66□□□□□ -1.98
CLN6Q9NWW5 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.66□□□□□ -1.98
CLN6Q9NWW5 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.66□□□□□ -1.98
CLN6Q9NWW5 RNU5A-7P-201ENST00000515979 116 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.66□□□□□ -1.98
CLN6Q9NWW5 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.66□□□□□ -1.98
CLN6Q9NWW5 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.66□□□□□ -1.98
CLN6Q9NWW5 UBL5P2-201ENST00000583788 219 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 AC006130.2-201ENST00000586202 326 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.66□□□□□ -1.98
CLN6Q9NWW5 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.66□□□□□ -1.98
CLN6Q9NWW5 AC096947.1-201ENST00000603233 470 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 RPL23AP92-201ENST00000603609 255 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 AC012443.1-201ENST00000605605 231 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.66□□□□□ -1.98
CLN6Q9NWW5 AC006249.1-201ENST00000621223 471 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 AC073592.7-201ENST00000623659 507 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 AC090617.7-201ENST00000623952 126 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CLN6Q9NWW5 AL513185.3-201ENST00000433335 1300 ntBASIC2.66□□□□□ -1.98
CLN6Q9NWW5 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms