Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 RNA5SP443-201ENST00000363083 132 ntBASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 RNU6-214P-201ENST00000384130 107 ntBASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 SNORD70.1-201ENST00000391007 85 ntBASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 RNU6-1156P-201ENST00000410365 100 ntBASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 RPL35AP3-201ENST00000414680 288 ntBASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 SDHDP6-201ENST00000414693 480 ntBASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 AC069213.2-201ENST00000420238 366 ntBASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 RPL12P17-201ENST00000432393 498 ntBASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 RHOT1P3-201ENST00000436571 331 ntBASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 Y_RNA.644-201ENST00000459006 113 ntBASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 RNU7-120P-201ENST00000459334 63 ntBASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 RN7SL269P-201ENST00000467795 305 ntBASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 AC083795.1-201ENST00000491760 320 ntBASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 AL139099.1-201ENST00000497398 403 ntBASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 Y_RNA.674-201ENST00000516362 113 ntBASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 AL121576.1-201ENST00000556055 276 ntBASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 AC006600.1-201ENST00000572529 153 ntBASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 BX284668.6-201ENST00000606899 438 ntBASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 AC211433.2-201ENST00000608433 387 ntBASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 AC004832.4-201ENST00000608952 331 ntBASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 MIR6809-201ENST00000612189 116 ntBASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 AP001282.2-201ENST00000616149 309 ntBASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 AC245014.3-201ENST00000618589 347 ntBASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 IQCB2P-201ENST00000401788 1633 ntBASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 AC144833.1-201ENST00000567953 4089 ntBASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 Y_RNA.122-201ENST00000363331 96 ntBASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 RNU6-1059P-201ENST00000363752 98 ntBASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 SNORD50.2-201ENST00000365465 70 ntBASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 RNU6-611P-201ENST00000384276 104 ntBASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 SNORA51.11-201ENST00000384442 131 ntBASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 SNORA16.2-201ENST00000390991 127 ntBASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 AL121835.1-201ENST00000404250 354 ntBASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 RNU2-15P-201ENST00000410692 191 ntBASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 RNU6-1203P-201ENST00000410703 110 ntBASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 RNU2-25P-201ENST00000411041 191 ntBASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 AL163193.1-201ENST00000444895 788 ntBASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 CEACAMP6-201ENST00000452007 574 ntBASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 CYCSP34-201ENST00000458172 304 ntBASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 AC108078.2-201ENST00000510750 236 ntBASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 ATP5LP3-201ENST00000514223 304 ntBASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 IGKV2D-36-201ENST00000518643 226 ntBASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 IGLV2-28-201ENST00000520681 304 ntBASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 AC005341.1-201ENST00000571086 708 ntBASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 AL390123.1-201ENST00000603216 237 ntBASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 AC099669.2-201ENST00000616549 437 ntBASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms