Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.82□□□□□ -1.48
ATG3Q9NT62 CKS1BP6-201ENST00000424932 240 ntBASIC5.82□□□□□ -1.48
ATG3Q9NT62 CBX3P6-201ENST00000430257 527 ntBASIC5.82□□□□□ -1.48
ATG3Q9NT62 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
ATG3Q9NT62 RPS15AP9-201ENST00000439856 381 ntBASIC5.82□□□□□ -1.48
ATG3Q9NT62 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.82□□□□□ -1.48
ATG3Q9NT62 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.82□□□□□ -1.48
ATG3Q9NT62 RNU6-261P-201ENST00000459506 102 ntBASIC5.82□□□□□ -1.48
ATG3Q9NT62 RNU6-329P-201ENST00000459618 107 ntBASIC5.82□□□□□ -1.48
ATG3Q9NT62 MRPS17P3-201ENST00000465453 385 ntBASIC5.82□□□□□ -1.48
ATG3Q9NT62 AL035404.1-201ENST00000497982 568 ntBASIC5.82□□□□□ -1.48
ATG3Q9NT62 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.82□□□□□ -1.48
ATG3Q9NT62 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.82□□□□□ -1.48
ATG3Q9NT62 IGKV2-36-201ENST00000519999 223 ntBASIC5.82□□□□□ -1.48
ATG3Q9NT62 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.82□□□□□ -1.48
ATG3Q9NT62 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG3Q9NT62 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG3Q9NT62 XIAPP1-201ENST00000603162 600 ntBASIC5.82□□□□□ -1.48
ATG3Q9NT62 AC080078.3-201ENST00000605407 463 ntBASIC5.82□□□□□ -1.48
ATG3Q9NT62 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.82□□□□□ -1.48
ATG3Q9NT62 MIR6891-201ENST00000618788 93 ntBASIC5.82□□□□□ -1.48
ATG3Q9NT62 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.82□□□□□ -1.48
ATG3Q9NT62 AC091925.1-201ENST00000623204 462 ntBASIC5.82□□□□□ -1.48
ATG3Q9NT62 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG3Q9NT62 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATG3Q9NT62 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
ATG3Q9NT62 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATG3Q9NT62 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.82□□□□□ -1.48
ATG3Q9NT62 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
ATG3Q9NT62 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATG3Q9NT62 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
ATG3Q9NT62 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATG3Q9NT62 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATG3Q9NT62 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATG3Q9NT62 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
ATG3Q9NT62 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.81□□□□□ -1.48
ATG3Q9NT62 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.81□□□□□ -1.48
ATG3Q9NT62 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG3Q9NT62 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.81□□□□□ -1.48
ATG3Q9NT62 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG3Q9NT62 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATG3Q9NT62 AL445487.1-201ENST00000415694 1580 ntBASIC5.81□□□□□ -1.48
ATG3Q9NT62 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATG3Q9NT62 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.81□□□□□ -1.48
ATG3Q9NT62 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
ATG3Q9NT62 MTCO1P12-201ENST00000414273 1543 ntBASIC5.81□□□□□ -1.48
ATG3Q9NT62 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG3Q9NT62 MIR331-201ENST00000362302 94 ntBASIC5.81□□□□□ -1.48
ATG3Q9NT62 RNU6-308P-201ENST00000390957 107 ntBASIC5.81□□□□□ -1.48
ATG3Q9NT62 AL022722.2-201ENST00000402519 180 ntBASIC5.81□□□□□ -1.48
ATG3Q9NT62 RPS20P2-201ENST00000402520 389 ntBASIC5.81□□□□□ -1.48
ATG3Q9NT62 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.81□□□□□ -1.48
ATG3Q9NT62 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.81□□□□□ -1.48
ATG3Q9NT62 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.81□□□□□ -1.48
ATG3Q9NT62 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG3Q9NT62 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.81□□□□□ -1.48
ATG3Q9NT62 SNORA84-201ENST00000459229 133 ntBASIC5.81□□□□□ -1.48
ATG3Q9NT62 AP000942.1-201ENST00000463969 747 ntBASIC5.81□□□□□ -1.48
ATG3Q9NT62 RN7SL283P-201ENST00000489055 303 ntBASIC5.81□□□□□ -1.48
ATG3Q9NT62 PARP4P3-201ENST00000510265 317 ntBASIC5.81□□□□□ -1.48
ATG3Q9NT62 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATG3Q9NT62 RNA5SP249-201ENST00000516127 99 ntBASIC5.81□□□□□ -1.48
ATG3Q9NT62 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.81□□□□□ -1.48
ATG3Q9NT62 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.81□□□□□ -1.48
ATG3Q9NT62 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.81□□□□□ -1.48
ATG3Q9NT62 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.81□□□□□ -1.48
ATG3Q9NT62 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.81□□□□□ -1.48
ATG3Q9NT62 VN1R84P-201ENST00000593697 235 ntBASIC5.81□□□□□ -1.48
ATG3Q9NT62 NUTF2P8-201ENST00000604593 363 ntBASIC5.81□□□□□ -1.48
ATG3Q9NT62 AC113403.1-201ENST00000604910 193 ntBASIC5.81□□□□□ -1.48
ATG3Q9NT62 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATG3Q9NT62 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.81□□□□□ -1.48
ATG3Q9NT62 AC015914.2-201ENST00000618167 288 ntBASIC5.81□□□□□ -1.48
ATG3Q9NT62 AC008785.1-201ENST00000624475 456 ntBASIC5.81□□□□□ -1.48
ATG3Q9NT62 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG3Q9NT62 AL133216.2-202ENST00000634512 349 ntBASIC5.81□□□□□ -1.48
ATG3Q9NT62 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATG3Q9NT62 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATG3Q9NT62 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG3Q9NT62 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATG3Q9NT62 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
ATG3Q9NT62 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATG3Q9NT62 NUP58P1-201ENST00000502546 1738 ntBASIC5.8□□□□□ -1.48
ATG3Q9NT62 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATG3Q9NT62 AC083843.2-201ENST00000568248 6253 ntBASIC5.8□□□□□ -1.48
ATG3Q9NT62 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATG3Q9NT62 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATG3Q9NT62 RNU1-94P-201ENST00000362627 173 ntBASIC5.8□□□□□ -1.48
ATG3Q9NT62 AL603908.1-201ENST00000406098 201 ntBASIC5.8□□□□□ -1.48
ATG3Q9NT62 AC127391.1-201ENST00000411737 98 ntBASIC5.8□□□□□ -1.48
ATG3Q9NT62 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.8□□□□□ -1.48
ATG3Q9NT62 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.8□□□□□ -1.48
ATG3Q9NT62 PMCHL1-202ENST00000423102 261 ntBASIC5.8□□□□□ -1.48
ATG3Q9NT62 NANOGP6-201ENST00000429190 847 ntBASIC5.8□□□□□ -1.48
ATG3Q9NT62 SNRPEP4-201ENST00000435815 279 ntBASIC5.8□□□□□ -1.48
ATG3Q9NT62 UBE2V1P5-201ENST00000440070 405 ntBASIC5.8□□□□□ -1.48
ATG3Q9NT62 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.8□□□□□ -1.48
ATG3Q9NT62 SUMO1P2-201ENST00000452524 304 ntBASIC5.8□□□□□ -1.48
ATG3Q9NT62 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG3Q9NT62 AC097493.1-201ENST00000463958 372 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms