Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC011611.5-201ENST00000552477 578 ntBASIC1.38□□□□□ -2.19
CDC42SE1Q9NRR8 AC005476.1-201ENST00000554427 397 ntBASIC1.38□□□□□ -2.19
CDC42SE1Q9NRR8 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
CDC42SE1Q9NRR8 AC067805.1-201ENST00000559344 470 ntBASIC1.38□□□□□ -2.19
CDC42SE1Q9NRR8 NIFKP8-201ENST00000560500 874 ntBASIC1.38□□□□□ -2.19
CDC42SE1Q9NRR8 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.38□□□□□ -2.19
CDC42SE1Q9NRR8 MIR5092-201ENST00000583139 88 ntBASIC1.38□□□□□ -2.19
CDC42SE1Q9NRR8 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.38□□□□□ -2.19
CDC42SE1Q9NRR8 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC1.38□□□□□ -2.19
CDC42SE1Q9NRR8 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.38□□□□□ -2.19
CDC42SE1Q9NRR8 AL589674.2-201ENST00000604304 337 ntBASIC1.38□□□□□ -2.19
CDC42SE1Q9NRR8 ACTR3BP1-201ENST00000605584 1247 ntBASIC1.38□□□□□ -2.19
CDC42SE1Q9NRR8 RNA5SP440-201ENST00000612665 119 ntBASIC1.38□□□□□ -2.19
CDC42SE1Q9NRR8 AC006213.4-201ENST00000616184 634 ntBASIC1.38□□□□□ -2.19
CDC42SE1Q9NRR8 MIR6741-201ENST00000618782 63 ntBASIC1.38□□□□□ -2.19
CDC42SE1Q9NRR8 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC1.38□□□□□ -2.19
CDC42SE1Q9NRR8 uc_338.20-201ENST00000621563 178 ntBASIC1.38□□□□□ -2.19
CDC42SE1Q9NRR8 U4.6-201ENST00000621618 127 ntBASIC1.38□□□□□ -2.19
CDC42SE1Q9NRR8 AC091953.5-201ENST00000622919 233 ntBASIC1.38□□□□□ -2.19
CDC42SE1Q9NRR8 AC104820.1-201ENST00000624183 307 ntBASIC1.38□□□□□ -2.19
CDC42SE1Q9NRR8 AC073592.6-201ENST00000624271 415 ntBASIC1.38□□□□□ -2.19
CDC42SE1Q9NRR8 AP000553.5-201ENST00000641933 54 ntBASIC1.38□□□□□ -2.19
CDC42SE1Q9NRR8 OR5H6-203ENST00000642105 978 ntBASIC1.38□□□□□ -2.19
CDC42SE1Q9NRR8 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CDC42SE1Q9NRR8 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC1.38□□□□□ -2.19
CDC42SE1Q9NRR8 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 RNU6-582P-201ENST00000362989 107 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 RNU1-100P-201ENST00000365255 165 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 MIR191-201ENST00000384873 92 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 MIR767-201ENST00000390228 109 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 CIR1P3-201ENST00000405137 479 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 RPS3AP24-201ENST00000407896 734 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 ERMN-204ENST00000409925 556 ntTSL 4 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 RN7SKP111-201ENST00000410349 271 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 RNU6-1328P-201ENST00000410938 106 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 HMGN1P24-201ENST00000412282 298 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 Z85995.1-201ENST00000415547 335 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 RBMY2QP-201ENST00000429799 1147 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 AL512637.2-201ENST00000431287 1256 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 AC108734.1-201ENST00000439549 399 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 CYCSP32-201ENST00000440548 321 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 RPL12P49-201ENST00000441100 121 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 AC009237.8-201ENST00000445492 379 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 NDUFA5P7-201ENST00000452914 242 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 RNA5SP233-201ENST00000459153 113 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 AC108729.2-201ENST00000476543 840 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 AC072052.1-201ENST00000496556 306 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 AC048346.1-201ENST00000510247 144 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 RNU2-45P-201ENST00000516068 187 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 RNU6-1282P-201ENST00000516735 96 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 RNA5SP364-201ENST00000516938 78 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 AC022634.1-201ENST00000520765 532 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 RGS4-209ENST00000531057 544 ntTSL 4 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 ANP32BP3-201ENST00000559213 706 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 LARP7P2-201ENST00000575306 125 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 CCDC58P3-201ENST00000590792 430 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 AC079791.1-201ENST00000605356 973 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 AC025594.3-201ENST00000613068 790 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 MIR6880-201ENST00000622851 62 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 AC090506.2-201ENST00000624521 419 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 OR4G11P-202ENST00000642116 1414 ntBASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
CDC42SE1Q9NRR8 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms