Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 VN1R92P-201ENST00000598511 928 ntBASIC3.41□□□□□ -1.86
VAT1LQ9HCJ6 AL033523.1-201ENST00000605153 153 ntBASIC3.41□□□□□ -1.86
VAT1LQ9HCJ6 CYCSP41-201ENST00000616920 296 ntBASIC3.41□□□□□ -1.86
VAT1LQ9HCJ6 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.41□□□□□ -1.86
VAT1LQ9HCJ6 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.41□□□□□ -1.86
VAT1LQ9HCJ6 CYP3A51P-201ENST00000633513 256 ntBASIC3.41□□□□□ -1.86
VAT1LQ9HCJ6 MFSD8-245ENST00000641743 948 ntBASIC3.41□□□□□ -1.86
VAT1LQ9HCJ6 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.41□□□□□ -1.86
VAT1LQ9HCJ6 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.41□□□□□ -1.86
VAT1LQ9HCJ6 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VAT1LQ9HCJ6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
VAT1LQ9HCJ6 AL645568.2-201ENST00000432815 1337 ntBASIC3.41□□□□□ -1.86
VAT1LQ9HCJ6 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VAT1LQ9HCJ6 MTND4P34-201ENST00000572715 1371 ntBASIC3.4□□□□□ -1.86
VAT1LQ9HCJ6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
VAT1LQ9HCJ6 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
VAT1LQ9HCJ6 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 ARF4P3-201ENST00000397387 509 ntBASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 AL079342.2-201ENST00000403367 482 ntBASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 RPL23AP47-201ENST00000408017 460 ntBASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 DPRXP1-201ENST00000426312 460 ntBASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 MTCO1P3-201ENST00000429327 192 ntBASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 MTCYBP31-201ENST00000438855 1122 ntBASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 NECAP1P2-201ENST00000455668 727 ntBASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 HMGB1P25-201ENST00000468402 607 ntBASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 RNU6-27P-201ENST00000516146 107 ntBASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 RNA5SP468-201ENST00000516782 93 ntBASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 RNU6-1028P-201ENST00000517164 93 ntBASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 AC027309.2-201ENST00000520566 192 ntBASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 EEF1B2P4-201ENST00000551398 348 ntBASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 MIR5708-201ENST00000579723 85 ntBASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 AC231759.1-201ENST00000616455 597 ntBASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 AL138955.1-201ENST00000622881 1040 ntBASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
VAT1LQ9HCJ6 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 AL049780.3-201ENST00000624612 1583 ntBASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 MIR148B-201ENST00000362252 99 ntBASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 RNU6-50P-201ENST00000362356 103 ntBASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 SNORA80A-201ENST00000363922 136 ntBASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 SNORA46-201ENST00000384762 135 ntBASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 SEPT7P5-201ENST00000434048 306 ntBASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 RPS20P5-201ENST00000434808 360 ntBASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 AC093155.1-201ENST00000440164 826 ntBASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 AC125238.1-201ENST00000448842 249 ntBASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 RN7SL633P-201ENST00000488974 297 ntBASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 AC096576.1-201ENST00000489014 359 ntBASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 AP001189.2-201ENST00000527320 189 ntBASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 DEFB130C-202ENST00000530001 230 ntBASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 AC006116.7-201ENST00000590141 756 ntBASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 AL137843.1-201ENST00000605078 385 ntBASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 AC093673.2-201ENST00000609674 331 ntBASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 RNU6-1192P-201ENST00000612197 107 ntBASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 RNU6-489P-201ENST00000618289 107 ntBASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 XIST_intron.1-201ENST00000619444 68 ntBASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 Z99496.1-201ENST00000469424 1477 ntBASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 MTCO1P23-201ENST00000415223 1526 ntBASIC3.39□□□□□ -1.87
VAT1LQ9HCJ6 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.38□□□□□ -1.87
VAT1LQ9HCJ6 AC093010.3-201ENST00000570269 15214 ntBASIC3.38□□□□□ -1.87
VAT1LQ9HCJ6 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.38□□□□□ -1.87
VAT1LQ9HCJ6 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.38□□□□□ -1.87
VAT1LQ9HCJ6 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
VAT1LQ9HCJ6 SNORA18.3-201ENST00000384122 132 ntBASIC3.38□□□□□ -1.87
VAT1LQ9HCJ6 RNU6-1257P-201ENST00000384625 110 ntBASIC3.38□□□□□ -1.87
VAT1LQ9HCJ6 MTCO1P56-201ENST00000401674 224 ntBASIC3.38□□□□□ -1.87
VAT1LQ9HCJ6 U3.42-201ENST00000408746 214 ntBASIC3.38□□□□□ -1.87
VAT1LQ9HCJ6 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.38□□□□□ -1.87
VAT1LQ9HCJ6 AC092447.6-201ENST00000414578 210 ntBASIC3.38□□□□□ -1.87
VAT1LQ9HCJ6 LUZP4P1-201ENST00000415420 344 ntBASIC3.38□□□□□ -1.87
VAT1LQ9HCJ6 RPS15AP6-201ENST00000420703 385 ntBASIC3.38□□□□□ -1.87
VAT1LQ9HCJ6 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.38□□□□□ -1.87
VAT1LQ9HCJ6 AC012497.1-201ENST00000429392 575 ntBASIC3.38□□□□□ -1.87
VAT1LQ9HCJ6 AL139132.1-201ENST00000431587 344 ntBASIC3.38□□□□□ -1.87
VAT1LQ9HCJ6 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.38□□□□□ -1.87
VAT1LQ9HCJ6 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms