Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 RNU5A-7P-201ENST00000515979 116 ntBASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 SNORA70.16-201ENST00000516390 95 ntBASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 AC027309.2-201ENST00000520566 192 ntBASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 AC122134.1-202ENST00000569111 1201 ntBASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 MIR4444-1-201ENST00000581696 74 ntBASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 MIR4444-2-201ENST00000584390 74 ntBASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 AP002826.1-201ENST00000608835 315 ntBASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 AC107308.1-201ENST00000615897 301 ntBASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 AL138880.2-201ENST00000616214 239 ntBASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 AC093831.2-201ENST00000624393 3427 ntBASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 AC008264.2-201ENST00000610193 3731 ntBASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 SNORA71.3-201ENST00000362582 128 ntBASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 RNA5SP267-201ENST00000364893 126 ntBASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 SUGT1P1-201ENST00000379514 476 ntBASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 SDCBPP3-201ENST00000419629 891 ntBASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 AL158156.1-201ENST00000422509 473 ntBASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 OR2B8P-201ENST00000432841 938 ntBASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 AL591503.2-201ENST00000442314 1005 ntBASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 AC016696.1-201ENST00000446949 318 ntBASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 PRSS3P4-201ENST00000453323 162 ntBASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 FTH1P2-201ENST00000466086 412 ntBASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 HSPD1P15-201ENST00000505573 1122 ntBASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 RN7SKP43-201ENST00000516173 320 ntBASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 OR5AK1P-201ENST00000524837 922 ntBASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 SETP7-201ENST00000552169 453 ntBASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 AL031176.1-201ENST00000604554 466 ntBASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 AP001521.1-201ENST00000609150 300 ntBASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 MIR7112-201ENST00000616126 65 ntBASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 MIR6075-201ENST00000620782 95 ntBASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 FAM35CP-201ENST00000554755 2470 ntBASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.12□□□□□ -1.91
LRRC40Q9H9A6 OR4G11P-202ENST00000642116 1414 ntBASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 RPL23AP57-201ENST00000332361 466 ntBASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 RNU6-799P-201ENST00000363567 107 ntBASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 RNU6-1027P-201ENST00000383998 107 ntBASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 RNU6-882P-201ENST00000391025 103 ntBASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 RNA5SP120-201ENST00000410900 112 ntBASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 YME1L1P1-201ENST00000429435 297 ntBASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 EZH2P1-201ENST00000431167 291 ntBASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 MUPP-201ENST00000438111 566 ntBASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 AC034236.1-201ENST00000469891 373 ntBASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 AC108860.1-201ENST00000484521 383 ntBASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 RN7SL20P-201ENST00000488827 297 ntBASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 AC010460.2-201ENST00000509054 677 ntBASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 RN7SKP282-201ENST00000516824 299 ntBASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 AP003168.1-201ENST00000530091 307 ntBASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 MIR4429-201ENST00000580105 73 ntBASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 UBL5P2-201ENST00000583788 219 ntBASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 AC084757.4-201ENST00000616350 526 ntBASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 CYCSP41-201ENST00000616920 296 ntBASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 U6.101-201ENST00000637707 76 ntBASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 OR8B1P-202ENST00000641132 1178 ntBASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 TAB3P1-202ENST00000452645 1634 ntBASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LRRC40Q9H9A6 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms