Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.42□□□□□ -2.02
VCX3BQ9H321 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VCX3BQ9H321 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.42□□□□□ -2.02
VCX3BQ9H321 AL513185.3-201ENST00000433335 1300 ntBASIC2.42□□□□□ -2.02
VCX3BQ9H321 AC000403.1-201ENST00000613696 3585 ntBASIC2.41□□□□□ -2.02
VCX3BQ9H321 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.41□□□□□ -2.02
VCX3BQ9H321 CR848007.1-201ENST00000442354 1699 ntBASIC2.41□□□□□ -2.02
VCX3BQ9H321 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.41□□□□□ -2.02
VCX3BQ9H321 SDAD1P2-201ENST00000441308 2028 ntBASIC2.41□□□□□ -2.02
VCX3BQ9H321 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.41□□□□□ -2.02
VCX3BQ9H321 RNU1-85P-201ENST00000364127 164 ntBASIC2.41□□□□□ -2.02
VCX3BQ9H321 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
VCX3BQ9H321 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VCX3BQ9H321 U3.40-201ENST00000408706 208 ntBASIC2.41□□□□□ -2.02
VCX3BQ9H321 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.41□□□□□ -2.02
VCX3BQ9H321 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.41□□□□□ -2.02
VCX3BQ9H321 FNDC3CP-201ENST00000420795 1155 ntBASIC2.41□□□□□ -2.02
VCX3BQ9H321 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.41□□□□□ -2.02
VCX3BQ9H321 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.41□□□□□ -2.02
VCX3BQ9H321 ARPC3P1-201ENST00000437218 533 ntBASIC2.41□□□□□ -2.02
VCX3BQ9H321 RAD1P2-201ENST00000446414 663 ntBASIC2.41□□□□□ -2.02
VCX3BQ9H321 OR6K5P-201ENST00000447050 945 ntBASIC2.41□□□□□ -2.02
VCX3BQ9H321 DPPA3P1-201ENST00000448050 469 ntBASIC2.41□□□□□ -2.02
VCX3BQ9H321 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.41□□□□□ -2.02
VCX3BQ9H321 AC117394.1-201ENST00000477323 567 ntBASIC2.41□□□□□ -2.02
VCX3BQ9H321 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.41□□□□□ -2.02
VCX3BQ9H321 BTF3P12-201ENST00000519620 469 ntBASIC2.41□□□□□ -2.02
VCX3BQ9H321 AC139103.1-201ENST00000534696 1030 ntBASIC2.41□□□□□ -2.02
VCX3BQ9H321 GLYCAM1-201ENST00000546596 285 ntBASIC2.41□□□□□ -2.02
VCX3BQ9H321 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.41□□□□□ -2.02
VCX3BQ9H321 AL442163.2-201ENST00000553912 710 ntBASIC2.41□□□□□ -2.02
VCX3BQ9H321 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.41□□□□□ -2.02
VCX3BQ9H321 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.41□□□□□ -2.02
VCX3BQ9H321 MIMT1-201ENST00000597105 1050 ntBASIC2.41□□□□□ -2.02
VCX3BQ9H321 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.41□□□□□ -2.02
VCX3BQ9H321 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.41□□□□□ -2.02
VCX3BQ9H321 AL031601.2-202ENST00000622650 282 ntBASIC2.41□□□□□ -2.02
VCX3BQ9H321 AL137003.2-201ENST00000606924 2538 ntBASIC2.41□□□□□ -2.02
VCX3BQ9H321 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
VCX3BQ9H321 AL049780.3-201ENST00000624612 1583 ntBASIC2.4□□□□□ -2.02
VCX3BQ9H321 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
VCX3BQ9H321 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
VCX3BQ9H321 SNORA63.1-201ENST00000362493 131 ntBASIC2.4□□□□□ -2.03
VCX3BQ9H321 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.4□□□□□ -2.03
VCX3BQ9H321 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VCX3BQ9H321 RNU4-74P-201ENST00000411280 161 ntBASIC2.4□□□□□ -2.03
VCX3BQ9H321 TATDN1P1-201ENST00000414123 891 ntBASIC2.4□□□□□ -2.03
VCX3BQ9H321 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
VCX3BQ9H321 USP9YP20-201ENST00000419224 558 ntBASIC2.4□□□□□ -2.03
VCX3BQ9H321 AL445584.1-201ENST00000431451 330 ntBASIC2.4□□□□□ -2.03
VCX3BQ9H321 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.4□□□□□ -2.03
VCX3BQ9H321 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VCX3BQ9H321 MORF4L1P4-201ENST00000450245 976 ntBASIC2.4□□□□□ -2.03
VCX3BQ9H321 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC2.4□□□□□ -2.03
VCX3BQ9H321 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.4□□□□□ -2.03
VCX3BQ9H321 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VCX3BQ9H321 AC079804.2-201ENST00000490376 200 ntBASIC2.4□□□□□ -2.03
VCX3BQ9H321 OR5H5P-201ENST00000503164 928 ntBASIC2.4□□□□□ -2.03
VCX3BQ9H321 HMGB1P47-201ENST00000511281 589 ntBASIC2.4□□□□□ -2.03
VCX3BQ9H321 AC112673.1-201ENST00000513168 575 ntBASIC2.4□□□□□ -2.03
VCX3BQ9H321 AP003467.2-201ENST00000520175 319 ntBASIC2.4□□□□□ -2.03
VCX3BQ9H321 CKS1BP7-201ENST00000522230 235 ntBASIC2.4□□□□□ -2.03
VCX3BQ9H321 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.4□□□□□ -2.03
VCX3BQ9H321 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.4□□□□□ -2.03
VCX3BQ9H321 AC007224.1-201ENST00000564410 144 ntBASIC2.4□□□□□ -2.03
VCX3BQ9H321 FAM60BP-201ENST00000578364 658 ntBASIC2.4□□□□□ -2.03
VCX3BQ9H321 AC005412.1-201ENST00000580812 1049 ntBASIC2.4□□□□□ -2.03
VCX3BQ9H321 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.4□□□□□ -2.03
VCX3BQ9H321 MIR3616-201ENST00000584070 92 ntBASIC2.4□□□□□ -2.03
VCX3BQ9H321 AL136295.6-201ENST00000610486 658 ntBASIC2.4□□□□□ -2.03
VCX3BQ9H321 AC015967.1-201ENST00000619893 476 ntBASIC2.4□□□□□ -2.03
VCX3BQ9H321 AC119674.1-220ENST00000641502 1048 ntBASIC2.4□□□□□ -2.03
VCX3BQ9H321 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.4□□□□□ -2.03
VCX3BQ9H321 ZNF720P1-201ENST00000562403 1939 ntBASIC2.4□□□□□ -2.03
VCX3BQ9H321 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
VCX3BQ9H321 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.39□□□□□ -2.03
VCX3BQ9H321 AC016716.1-201ENST00000265882 708 ntBASIC2.39□□□□□ -2.03
VCX3BQ9H321 SNORA68.1-201ENST00000364537 132 ntBASIC2.39□□□□□ -2.03
VCX3BQ9H321 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
VCX3BQ9H321 SNORA51.11-201ENST00000384442 131 ntBASIC2.39□□□□□ -2.03
VCX3BQ9H321 AC099677.1-201ENST00000420575 175 ntBASIC2.39□□□□□ -2.03
VCX3BQ9H321 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
VCX3BQ9H321 AC098826.1-201ENST00000433943 471 ntBASIC2.39□□□□□ -2.03
VCX3BQ9H321 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.39□□□□□ -2.03
VCX3BQ9H321 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.39□□□□□ -2.03
VCX3BQ9H321 BX248409.1-201ENST00000455497 255 ntBASIC2.39□□□□□ -2.03
VCX3BQ9H321 AC097493.1-201ENST00000463958 372 ntBASIC2.39□□□□□ -2.03
VCX3BQ9H321 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.39□□□□□ -2.03
VCX3BQ9H321 RPS27P21-201ENST00000486977 252 ntBASIC2.39□□□□□ -2.03
VCX3BQ9H321 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VCX3BQ9H321 AC025459.1-201ENST00000504072 156 ntBASIC2.39□□□□□ -2.03
VCX3BQ9H321 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.39□□□□□ -2.03
VCX3BQ9H321 AC008885.1-201ENST00000514930 301 ntBASIC2.39□□□□□ -2.03
VCX3BQ9H321 AC009812.2-201ENST00000517657 457 ntBASIC2.39□□□□□ -2.03
VCX3BQ9H321 PSMA2P1-201ENST00000526365 646 ntBASIC2.39□□□□□ -2.03
VCX3BQ9H321 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC2.39□□□□□ -2.03
VCX3BQ9H321 H3F3AP1-201ENST00000559984 334 ntBASIC2.39□□□□□ -2.03
VCX3BQ9H321 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.39□□□□□ -2.03
VCX3BQ9H321 AGGF1P5-201ENST00000567900 919 ntBASIC2.39□□□□□ -2.03
VCX3BQ9H321 MIR5680-201ENST00000577577 84 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms