Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC104563.1-201ENST00000476147 376 ntBASIC4.97□□□□□ -1.61
RNF38Q9H0F5 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.97□□□□□ -1.61
RNF38Q9H0F5 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF38Q9H0F5 AC073073.1-201ENST00000493920 463 ntBASIC4.97□□□□□ -1.61
RNF38Q9H0F5 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF38Q9H0F5 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.97□□□□□ -1.61
RNF38Q9H0F5 HMGB1P19-201ENST00000517578 577 ntBASIC4.97□□□□□ -1.61
RNF38Q9H0F5 AL110118.1-201ENST00000553543 400 ntBASIC4.97□□□□□ -1.61
RNF38Q9H0F5 AC026464.5-201ENST00000562497 722 ntBASIC4.97□□□□□ -1.61
RNF38Q9H0F5 AC006116.10-201ENST00000591836 581 ntBASIC4.97□□□□□ -1.61
RNF38Q9H0F5 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF38Q9H0F5 AC009318.4-201ENST00000620496 486 ntBASIC4.97□□□□□ -1.61
RNF38Q9H0F5 AP000843.1-201ENST00000624880 701 ntBASIC4.97□□□□□ -1.61
RNF38Q9H0F5 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF38Q9H0F5 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF38Q9H0F5 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF38Q9H0F5 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF38Q9H0F5 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
RNF38Q9H0F5 AC006020.1-201ENST00000420179 1854 ntBASIC4.96□□□□□ -1.61
RNF38Q9H0F5 AC097504.1-201ENST00000515103 2415 ntBASIC4.96□□□□□ -1.61
RNF38Q9H0F5 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.61
RNF38Q9H0F5 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.96□□□□□ -1.62
RNF38Q9H0F5 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF38Q9H0F5 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.96□□□□□ -1.62
RNF38Q9H0F5 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
RNF38Q9H0F5 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF38Q9H0F5 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF38Q9H0F5 AC126755.2-208ENST00000327792 462 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 AC138969.1-213ENST00000331436 462 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 Y_RNA.315-201ENST00000365117 102 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 RNU6-108P-201ENST00000365558 107 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 AC019155.1-201ENST00000382242 574 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 Y_RNA.387-201ENST00000383918 102 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 MIR559-201ENST00000385188 96 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 RN7SKP247-201ENST00000411094 308 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.96□□□□□ -1.62
RNF38Q9H0F5 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.96□□□□□ -1.62
RNF38Q9H0F5 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.96□□□□□ -1.62
RNF38Q9H0F5 PSMA2P3-201ENST00000429685 675 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 AL451139.1-201ENST00000434718 346 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.96□□□□□ -1.62
RNF38Q9H0F5 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.96□□□□□ -1.62
RNF38Q9H0F5 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.96□□□□□ -1.62
RNF38Q9H0F5 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.96□□□□□ -1.62
RNF38Q9H0F5 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.96□□□□□ -1.62
RNF38Q9H0F5 AC130509.1-201ENST00000464158 433 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 AC006512.1-201ENST00000468816 291 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 PABPC1P3-201ENST00000469174 459 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 CEACAMP10-202ENST00000495431 496 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 AC090453.1-201ENST00000495560 436 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.96□□□□□ -1.62
RNF38Q9H0F5 AC093677.1-201ENST00000514414 678 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 RNU6-1170P-201ENST00000515974 106 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 RN7SKP234-201ENST00000517173 224 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 RN7SKP92-201ENST00000517266 244 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 AC105031.1-201ENST00000518550 476 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 AC090572.1-201ENST00000519251 160 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 IGLVIV-53-201ENST00000520107 367 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 RPL23AP53-201ENST00000521854 457 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 AC005868.1-201ENST00000536421 331 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 ELOCP31-201ENST00000540463 467 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 AC006349.1-201ENST00000555526 235 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 AL355836.1-201ENST00000555951 870 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.96□□□□□ -1.62
RNF38Q9H0F5 AL356432.3-201ENST00000568952 465 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 HNRNPCP4-201ENST00000571636 900 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 AC007151.1-201ENST00000572774 483 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 AC025588.3-201ENST00000604182 274 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 BX005214.3-202ENST00000619809 325 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 AC022106.2-201ENST00000620114 757 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
RNF38Q9H0F5 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF38Q9H0F5 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF38Q9H0F5 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
RNF38Q9H0F5 DHX40P1-201ENST00000588725 1412 ntBASIC4.96□□□□□ -1.62
RNF38Q9H0F5 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.96□□□□□ -1.62
RNF38Q9H0F5 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.96□□□□□ -1.62
RNF38Q9H0F5 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RNF38Q9H0F5 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF38Q9H0F5 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 AC104118.1-201ENST00000607625 1589 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 Y_RNA.128-201ENST00000363391 112 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 RNU6-43P-201ENST00000384302 107 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 SNORD37.1-201ENST00000390968 65 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 MIR1271-201ENST00000408537 86 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 Y_RNA.615-201ENST00000410769 117 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 AL356276.2-201ENST00000435919 558 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 CYCSP24-201ENST00000445119 316 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms