Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC107398.1-201ENST00000486904 505 ntBASIC2.71□□□□□ -1.98
TRIM4Q9C037 FAM172BP-201ENST00000487497 1089 ntBASIC2.71□□□□□ -1.98
TRIM4Q9C037 SETP12-201ENST00000514068 805 ntBASIC2.71□□□□□ -1.98
TRIM4Q9C037 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.71□□□□□ -1.98
TRIM4Q9C037 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.71□□□□□ -1.98
TRIM4Q9C037 AC087373.1-201ENST00000524920 491 ntBASIC2.71□□□□□ -1.98
TRIM4Q9C037 AP004371.1-201ENST00000525240 214 ntBASIC2.71□□□□□ -1.98
TRIM4Q9C037 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.71□□□□□ -1.98
TRIM4Q9C037 AC128657.1-201ENST00000549459 145 ntBASIC2.71□□□□□ -1.98
TRIM4Q9C037 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.71□□□□□ -1.98
TRIM4Q9C037 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.71□□□□□ -1.98
TRIM4Q9C037 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
TRIM4Q9C037 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
TRIM4Q9C037 AC091564.4-201ENST00000533934 2194 ntBASIC2.71□□□□□ -1.98
TRIM4Q9C037 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.71□□□□□ -1.98
TRIM4Q9C037 AC093536.2-201ENST00000565257 1406 ntBASIC2.7□□□□□ -1.98
TRIM4Q9C037 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
TRIM4Q9C037 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
TRIM4Q9C037 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.7□□□□□ -1.98
TRIM4Q9C037 SNORD21-201ENST00000383953 95 ntBASIC2.7□□□□□ -1.98
TRIM4Q9C037 MIR764-201ENST00000390811 85 ntBASIC2.7□□□□□ -1.98
TRIM4Q9C037 AL591034.1-201ENST00000407447 340 ntBASIC2.7□□□□□ -1.98
TRIM4Q9C037 MTCYBP24-201ENST00000420387 1106 ntBASIC2.7□□□□□ -1.98
TRIM4Q9C037 ISCA1P6-201ENST00000427740 390 ntBASIC2.7□□□□□ -1.98
TRIM4Q9C037 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.7□□□□□ -1.98
TRIM4Q9C037 HMGB1P48-201ENST00000446155 598 ntBASIC2.7□□□□□ -1.98
TRIM4Q9C037 AL024509.2-201ENST00000493462 493 ntBASIC2.7□□□□□ -1.98
TRIM4Q9C037 AC135721.1-201ENST00000497954 479 ntBASIC2.7□□□□□ -1.98
TRIM4Q9C037 AC108210.2-201ENST00000503681 201 ntBASIC2.7□□□□□ -1.98
TRIM4Q9C037 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.7□□□□□ -1.98
TRIM4Q9C037 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.7□□□□□ -1.98
TRIM4Q9C037 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.7□□□□□ -1.98
TRIM4Q9C037 AC008549.1-201ENST00000512900 643 ntBASIC2.7□□□□□ -1.98
TRIM4Q9C037 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.7□□□□□ -1.98
TRIM4Q9C037 SNORA9.3-201ENST00000516383 129 ntBASIC2.7□□□□□ -1.98
TRIM4Q9C037 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.7□□□□□ -1.98
TRIM4Q9C037 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.7□□□□□ -1.98
TRIM4Q9C037 NBEAP1-201ENST00000554452 979 ntBASIC2.7□□□□□ -1.98
TRIM4Q9C037 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.7□□□□□ -1.98
TRIM4Q9C037 ACTR3BP3-201ENST00000565577 979 ntBASIC2.7□□□□□ -1.98
TRIM4Q9C037 AP001029.3-201ENST00000588063 596 ntBASIC2.7□□□□□ -1.98
TRIM4Q9C037 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.7□□□□□ -1.98
TRIM4Q9C037 AL590282.1-201ENST00000610379 1136 ntBASIC2.7□□□□□ -1.98
TRIM4Q9C037 BX664608.1-201ENST00000610519 487 ntBASIC2.7□□□□□ -1.98
TRIM4Q9C037 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
TRIM4Q9C037 AC009039.2-201ENST00000624524 529 ntBASIC2.7□□□□□ -1.98
TRIM4Q9C037 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
TRIM4Q9C037 MAPK10-266ENST00000641066 6555 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.69□□□□□ -1.98
TRIM4Q9C037 RNA5SP99-201ENST00000364020 114 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 RNU6-1180P-201ENST00000364935 107 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.69□□□□□ -1.98
TRIM4Q9C037 RNU4-31P-201ENST00000384211 141 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 MIR144-201ENST00000384886 86 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 AL513175.2-201ENST00000422071 443 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 RPS20P5-201ENST00000434808 360 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.69□□□□□ -1.98
TRIM4Q9C037 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 ELOCP13-201ENST00000443934 329 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 HSFY3P-201ENST00000444242 1191 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
TRIM4Q9C037 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.69□□□□□ -1.98
TRIM4Q9C037 snoU13.23-201ENST00000458863 104 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 snoU13.15-201ENST00000459407 104 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 AC003982.1-202ENST00000469928 248 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
TRIM4Q9C037 HSPE1P6-201ENST00000479457 291 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC2.69□□□□□ -1.98
TRIM4Q9C037 RNU6-548P-201ENST00000517083 115 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 RN7SKP283-201ENST00000517197 270 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 AC022616.2-201ENST00000523185 300 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 AL133271.1-201ENST00000538229 291 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.69□□□□□ -1.98
TRIM4Q9C037 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.69□□□□□ -1.98
TRIM4Q9C037 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.69□□□□□ -1.98
TRIM4Q9C037 MYL12BP1-201ENST00000569826 507 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 TPMTP1-201ENST00000592307 737 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 AL133507.1-201ENST00000605269 557 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 BNIP3P7-201ENST00000605641 516 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 U73479.1-201ENST00000618062 168 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 AC007275.1-201ENST00000621243 671 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.69□□□□□ -1.98
TRIM4Q9C037 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.69□□□□□ -1.98
TRIM4Q9C037 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 AC096644.4-201ENST00000563417 2912 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 ZNF37BP-203ENST00000452306 1352 ntBASIC2.69□□□□□ -1.98
TRIM4Q9C037 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
TRIM4Q9C037 AC092593.1-201ENST00000515413 1815 ntBASIC2.68□□□□□ -1.98
TRIM4Q9C037 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
TRIM4Q9C037 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.68□□□□□ -1.98
TRIM4Q9C037 RNU6-799P-201ENST00000363567 107 ntBASIC2.68□□□□□ -1.98
TRIM4Q9C037 SNORA9.2-201ENST00000365361 133 ntBASIC2.68□□□□□ -1.98
TRIM4Q9C037 MIR512-1-201ENST00000384913 84 ntBASIC2.68□□□□□ -1.98
TRIM4Q9C037 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.68□□□□□ -1.98
TRIM4Q9C037 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.68□□□□□ -1.98
TRIM4Q9C037 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.68□□□□□ -1.98
TRIM4Q9C037 HMGN2P30-201ENST00000423237 256 ntBASIC2.68□□□□□ -1.98
TRIM4Q9C037 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.68□□□□□ -1.98
TRIM4Q9C037 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.68□□□□□ -1.98
TRIM4Q9C037 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 289.4 ms