Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 HSPA8P15-201ENST00000401676 786 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AC010154.1-201ENST00000425857 269 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AC016696.1-201ENST00000446949 318 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AC005229.2-201ENST00000456995 399 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 IGKV1OR22-5-201ENST00000458718 354 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AC087477.1-201ENST00000465747 340 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AC084198.1-201ENST00000477747 402 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AC069499.1-201ENST00000489433 509 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AP001086.1-201ENST00000494882 321 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AC108078.2-201ENST00000510750 236 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AC074255.1-201ENST00000511259 501 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AC092436.3-201ENST00000511788 257 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 RNU6-911P-201ENST00000516523 104 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 FAM60DP-201ENST00000524174 632 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AC025423.5-201ENST00000550230 219 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AL359219.2-201ENST00000555184 348 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AC009852.2-201ENST00000567898 485 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AC008521.1-201ENST00000587471 187 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AC104465.1-201ENST00000611365 139 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AC011944.2-201ENST00000624440 683 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
COL25A1Q9BXS0 AC090740.1-201ENST00000623193 2262 ntBASIC5.65□□□□□ -1.51
COL25A1Q9BXS0 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
COL25A1Q9BXS0 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
COL25A1Q9BXS0 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL25A1Q9BXS0 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.65□□□□□ -1.51
COL25A1Q9BXS0 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL25A1Q9BXS0 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.65□□□□□ -1.51
COL25A1Q9BXS0 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL25A1Q9BXS0 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.65□□□□□ -1.51
COL25A1Q9BXS0 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.65□□□□□ -1.51
COL25A1Q9BXS0 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL25A1Q9BXS0 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL25A1Q9BXS0 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.65□□□□□ -1.51
COL25A1Q9BXS0 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
COL25A1Q9BXS0 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL25A1Q9BXS0 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 AC090220.1-201ENST00000593078 1699 ntBASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 Y_RNA.43-201ENST00000362670 111 ntBASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 RNU1-76P-201ENST00000362903 159 ntBASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 Y_RNA.151-201ENST00000363566 112 ntBASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 RNU6-1020P-201ENST00000363684 107 ntBASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 RNA5SP455-201ENST00000365190 119 ntBASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 RNU6-393P-201ENST00000384475 107 ntBASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 Y_RNA.626-201ENST00000411288 95 ntBASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 RPS24P16-201ENST00000497294 392 ntBASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 RPL7P47-201ENST00000497299 556 ntBASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 RBBP4P6-201ENST00000508098 202 ntBASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 RNU2-69P-201ENST00000516061 100 ntBASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 CYCSP27-201ENST00000527643 293 ntBASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 DUX4L52-201ENST00000549363 777 ntBASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 AC126177.3-201ENST00000551839 688 ntBASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 AC006130.2-201ENST00000586202 326 ntBASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 PSMA6P4-201ENST00000603247 718 ntBASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 AC012443.1-201ENST00000605605 231 ntBASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 NANOGP3-201ENST00000605855 286 ntBASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 AL049794.2-201ENST00000616301 365 ntBASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 AC092724.1-201ENST00000624623 3397 ntBASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.64□□□□□ -1.51
COL25A1Q9BXS0 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms