Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 MTND2P18-201ENST00000419962 1030 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AL365203.2-201ENST00000423444 196 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 RPL7P46-201ENST00000425129 740 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 RPS25P9-201ENST00000435591 252 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 CST9LP2-201ENST00000437612 320 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 MTND4P6-201ENST00000438297 472 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AC092427.1-201ENST00000439177 601 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 RPL21P2-201ENST00000440049 481 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AL133217.1-201ENST00000450980 425 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 RPL26P28-201ENST00000451325 435 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AC104308.1-201ENST00000454621 333 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 USP9YP10-201ENST00000454868 628 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 NDUFA5P9-201ENST00000472609 340 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AC006483.1-201ENST00000487308 313 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AC147055.4-201ENST00000504399 745 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 MTCYBP37-201ENST00000510642 1133 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AC016065.2-201ENST00000514530 444 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 RNU6-583P-201ENST00000516012 92 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 OR4A45P-201ENST00000529954 901 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AL163153.1-201ENST00000554223 283 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AC008015.1-201ENST00000555505 465 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 RN7SL703P-201ENST00000578485 302 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 MIR4474-201ENST00000579189 78 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 MIR4286-201ENST00000580651 93 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 VN1R92P-201ENST00000598511 928 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 MIR6820-201ENST00000611508 62 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AL139418.1-201ENST00000613613 177 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 AL079343.1-201ENST00000572358 1771 ntBASIC3.25□□□□□ -1.89
CCDC28BQ9BUN5 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 RN7SKP280-201ENST00000364196 304 ntBASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 SNORA51.6-201ENST00000384151 125 ntBASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 SNORA46-201ENST00000384762 135 ntBASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 AL590084.2-201ENST00000401481 382 ntBASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 RNA5SP44-201ENST00000410446 133 ntBASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 RNU4-72P-201ENST00000410754 173 ntBASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 AL022400.1-201ENST00000423946 935 ntBASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 Z83846.1-201ENST00000446798 265 ntBASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 RPL29P29-201ENST00000448725 423 ntBASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 TPT1P13-201ENST00000449760 499 ntBASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 AC115115.1-201ENST00000449927 248 ntBASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 BX276092.4-201ENST00000452056 248 ntBASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 TRGVB-201ENST00000453257 471 ntBASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 AC092757.1-201ENST00000467293 467 ntBASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 ST13P14-201ENST00000474095 734 ntBASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 OR4R3P-201ENST00000525084 838 ntBASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 AC008127.2-201ENST00000549925 1075 ntBASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 CENPUP2-201ENST00000555897 1186 ntBASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 PARP1P2-201ENST00000556806 195 ntBASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 AC109446.2-201ENST00000567872 497 ntBASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 AC015917.1-201ENST00000579654 510 ntBASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 AC005412.1-201ENST00000580812 1049 ntBASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 AC007566.2-201ENST00000603642 413 ntBASIC3.24□□□□□ -1.89
CCDC28BQ9BUN5 AC010591.1-201ENST00000603941 649 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms