Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 RNU6-877P-201ENST00000383868 107 ntBASIC4.25□□□□□ -1.73
VRK1Q99986 RNU6-606P-201ENST00000384721 111 ntBASIC4.25□□□□□ -1.73
VRK1Q99986 MIR124-3-201ENST00000384866 87 ntBASIC4.25□□□□□ -1.73
VRK1Q99986 MIR1-2-201ENST00000384961 85 ntBASIC4.25□□□□□ -1.73
VRK1Q99986 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VRK1Q99986 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VRK1Q99986 SNORA77-201ENST00000408716 125 ntBASIC4.25□□□□□ -1.73
VRK1Q99986 RNA5SP107-201ENST00000411358 122 ntBASIC4.25□□□□□ -1.73
VRK1Q99986 SNRPEP10-201ENST00000420249 274 ntBASIC4.25□□□□□ -1.73
VRK1Q99986 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.25□□□□□ -1.73
VRK1Q99986 AL139413.1-201ENST00000421309 217 ntBASIC4.25□□□□□ -1.73
VRK1Q99986 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.25□□□□□ -1.73
VRK1Q99986 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.25□□□□□ -1.73
VRK1Q99986 AC092162.1-201ENST00000432828 434 ntBASIC4.25□□□□□ -1.73
VRK1Q99986 RPS20P5-201ENST00000434808 360 ntBASIC4.25□□□□□ -1.73
VRK1Q99986 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VRK1Q99986 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.25□□□□□ -1.73
VRK1Q99986 RPS15AP9-201ENST00000439856 381 ntBASIC4.25□□□□□ -1.73
VRK1Q99986 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.25□□□□□ -1.73
VRK1Q99986 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.25□□□□□ -1.73
VRK1Q99986 DDX3P2-201ENST00000446138 111 ntBASIC4.25□□□□□ -1.73
VRK1Q99986 DPPA3P1-201ENST00000448050 469 ntBASIC4.25□□□□□ -1.73
VRK1Q99986 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.25□□□□□ -1.73
VRK1Q99986 AC006480.1-201ENST00000449887 378 ntBASIC4.25□□□□□ -1.73
VRK1Q99986 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.25□□□□□ -1.73
VRK1Q99986 HSPD1P15-201ENST00000505573 1122 ntBASIC4.25□□□□□ -1.73
VRK1Q99986 VWA8P1-201ENST00000510889 176 ntBASIC4.25□□□□□ -1.73
VRK1Q99986 AC114797.1-201ENST00000514003 728 ntBASIC4.25□□□□□ -1.73
VRK1Q99986 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.25□□□□□ -1.73
VRK1Q99986 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.25□□□□□ -1.73
VRK1Q99986 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.25□□□□□ -1.73
VRK1Q99986 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.25□□□□□ -1.73
VRK1Q99986 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.25□□□□□ -1.73
VRK1Q99986 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.25□□□□□ -1.73
VRK1Q99986 AL121603.1-201ENST00000553815 142 ntBASIC4.25□□□□□ -1.73
VRK1Q99986 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.25□□□□□ -1.73
VRK1Q99986 CYCSP40-201ENST00000575927 294 ntBASIC4.25□□□□□ -1.73
VRK1Q99986 MIR4293-201ENST00000584305 78 ntBASIC4.25□□□□□ -1.73
VRK1Q99986 AC010928.1-201ENST00000592477 1447 ntBASIC4.25□□□□□ -1.73
VRK1Q99986 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VRK1Q99986 SAMMSON-226ENST00000642089 1582 ntBASIC4.25□□□□□ -1.73
VRK1Q99986 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
VRK1Q99986 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.24□□□□□ -1.73
VRK1Q99986 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
VRK1Q99986 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
VRK1Q99986 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
VRK1Q99986 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VRK1Q99986 AL136964.1-201ENST00000622038 2990 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.24□□□□□ -1.73
VRK1Q99986 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
VRK1Q99986 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VRK1Q99986 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
VRK1Q99986 Y_RNA.22-201ENST00000362492 102 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 RNA5SP502-201ENST00000362694 119 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 Y_RNA.303-201ENST00000364998 94 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 RNU6-39P-201ENST00000384344 107 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 RNU6-1158P-201ENST00000391167 107 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.24□□□□□ -1.73
VRK1Q99986 AL592291.1-201ENST00000403830 352 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 Y_RNA.625-201ENST00000411256 107 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 AC138393.2-201ENST00000414742 246 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.24□□□□□ -1.73
VRK1Q99986 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.24□□□□□ -1.73
VRK1Q99986 AL109913.1-201ENST00000421173 514 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VRK1Q99986 AC244098.2-201ENST00000422068 99 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.24□□□□□ -1.73
VRK1Q99986 OR2AS1P-201ENST00000427827 319 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 USP9YP9-201ENST00000429406 715 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.24□□□□□ -1.73
VRK1Q99986 AL121871.1-201ENST00000443413 436 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 TDGF1P1-201ENST00000445734 527 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 OR1H1P-201ENST00000448731 937 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 AC133473.1-201ENST00000455173 299 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 AL356010.1-201ENST00000456364 102 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.24□□□□□ -1.73
VRK1Q99986 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.24□□□□□ -1.73
VRK1Q99986 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.24□□□□□ -1.73
VRK1Q99986 RPS15AP36-201ENST00000492022 382 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.24□□□□□ -1.73
VRK1Q99986 SNORD27.1-201ENST00000516319 72 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 SNORA40.12-201ENST00000516329 111 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 RNU7-51P-201ENST00000516560 62 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.24□□□□□ -1.73
VRK1Q99986 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.24□□□□□ -1.73
VRK1Q99986 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.24□□□□□ -1.73
VRK1Q99986 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.24□□□□□ -1.73
VRK1Q99986 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.24□□□□□ -1.73
VRK1Q99986 OR5BN1P-201ENST00000532955 829 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 AC005868.1-201ENST00000536421 331 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.24□□□□□ -1.73
VRK1Q99986 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VRK1Q99986 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.24□□□□□ -1.73
VRK1Q99986 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.24□□□□□ -1.73
VRK1Q99986 AL121579.1-201ENST00000555129 305 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 TVP23CP2-201ENST00000571473 623 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 MIR3667-201ENST00000581025 74 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 MIR4270-201ENST00000581799 70 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 SLC25A36P1-201ENST00000590111 465 ntBASIC4.24□□□□□ -1.73
VRK1Q99986 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms