Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 USP9YP19-201ENST00000412165 485 ntBASIC2.85□□□□□ -1.95
CDX2Q99626 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.85□□□□□ -1.95
CDX2Q99626 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.85□□□□□ -1.95
CDX2Q99626 RPL31P12-201ENST00000422587 358 ntBASIC2.85□□□□□ -1.95
CDX2Q99626 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.85□□□□□ -1.95
CDX2Q99626 TRIAP1P1-201ENST00000427062 225 ntBASIC2.85□□□□□ -1.95
CDX2Q99626 AL590762.3-201ENST00000436372 640 ntBASIC2.85□□□□□ -1.95
CDX2Q99626 AC017099.1-201ENST00000448261 1028 ntBASIC2.85□□□□□ -1.95
CDX2Q99626 AC245517.4-201ENST00000448601 281 ntBASIC2.85□□□□□ -1.95
CDX2Q99626 RPL7P52-201ENST00000449200 742 ntBASIC2.85□□□□□ -1.95
CDX2Q99626 AL035407.2-201ENST00000454090 378 ntBASIC2.85□□□□□ -1.95
CDX2Q99626 ARPC3P2-201ENST00000457786 533 ntBASIC2.85□□□□□ -1.95
CDX2Q99626 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.85□□□□□ -1.95
CDX2Q99626 AC010401.1-201ENST00000463867 348 ntBASIC2.85□□□□□ -1.95
CDX2Q99626 RPS27P23-201ENST00000487608 251 ntBASIC2.85□□□□□ -1.95
CDX2Q99626 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.85□□□□□ -1.95
CDX2Q99626 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.85□□□□□ -1.95
CDX2Q99626 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.85□□□□□ -1.95
CDX2Q99626 AP000867.2-201ENST00000532468 320 ntBASIC2.85□□□□□ -1.95
CDX2Q99626 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.85□□□□□ -1.95
CDX2Q99626 AL163153.1-201ENST00000554223 283 ntBASIC2.85□□□□□ -1.95
CDX2Q99626 AL845331.3-202ENST00000562856 261 ntBASIC2.85□□□□□ -1.95
CDX2Q99626 MIR3690-201ENST00000580266 75 ntBASIC2.85□□□□□ -1.95
CDX2Q99626 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.85□□□□□ -1.95
CDX2Q99626 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.85□□□□□ -1.95
CDX2Q99626 AC011492.1-201ENST00000600023 315 ntBASIC2.85□□□□□ -1.95
CDX2Q99626 AC016877.3-201ENST00000606778 504 ntBASIC2.85□□□□□ -1.95
CDX2Q99626 RMST_10.1-201ENST00000616309 154 ntBASIC2.85□□□□□ -1.95
CDX2Q99626 AL445493.3-201ENST00000619568 477 ntBASIC2.85□□□□□ -1.95
CDX2Q99626 AC006111.3-201ENST00000622137 383 ntBASIC2.85□□□□□ -1.95
CDX2Q99626 AC017104.5-201ENST00000637647 639 ntBASIC2.85□□□□□ -1.95
CDX2Q99626 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.85□□□□□ -1.95
CDX2Q99626 MAPK10-266ENST00000641066 6555 ntBASIC2.84□□□□□ -1.95
CDX2Q99626 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.84□□□□□ -1.95
CDX2Q99626 AC007496.3-201ENST00000624987 3443 ntBASIC2.84□□□□□ -1.95
CDX2Q99626 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CDX2Q99626 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CDX2Q99626 AC006020.1-201ENST00000420179 1854 ntBASIC2.84□□□□□ -1.95
CDX2Q99626 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CDX2Q99626 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CDX2Q99626 RNU6-600P-201ENST00000362524 99 ntBASIC2.84□□□□□ -1.95
CDX2Q99626 RNU6-650P-201ENST00000365658 111 ntBASIC2.84□□□□□ -1.95
CDX2Q99626 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CDX2Q99626 DNAJC19P6-201ENST00000401853 280 ntBASIC2.84□□□□□ -1.95
CDX2Q99626 RNA5SP274-201ENST00000410484 108 ntBASIC2.84□□□□□ -1.95
CDX2Q99626 AC007064.1-201ENST00000412238 351 ntBASIC2.84□□□□□ -1.95
CDX2Q99626 AL445183.3-201ENST00000414168 502 ntBASIC2.84□□□□□ -1.95
CDX2Q99626 EI24P1-201ENST00000416584 867 ntBASIC2.84□□□□□ -1.95
CDX2Q99626 AL137014.1-201ENST00000420490 1226 ntBASIC2.84□□□□□ -1.95
CDX2Q99626 RPS15AP6-201ENST00000420703 385 ntBASIC2.84□□□□□ -1.95
CDX2Q99626 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.84□□□□□ -1.95
CDX2Q99626 BX679664.1-201ENST00000434429 253 ntBASIC2.84□□□□□ -1.95
CDX2Q99626 YWHAZP8-201ENST00000436935 731 ntBASIC2.84□□□□□ -1.95
CDX2Q99626 HMGN2P16-201ENST00000456802 261 ntBASIC2.84□□□□□ -1.95
CDX2Q99626 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.84□□□□□ -1.95
CDX2Q99626 RPL30P9-201ENST00000465586 330 ntBASIC2.84□□□□□ -1.95
CDX2Q99626 RNU6-1053P-201ENST00000515930 101 ntBASIC2.84□□□□□ -1.95
CDX2Q99626 RN7SKP96-201ENST00000516948 297 ntBASIC2.84□□□□□ -1.95
CDX2Q99626 MTND2P7-201ENST00000521337 640 ntBASIC2.84□□□□□ -1.95
CDX2Q99626 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.84□□□□□ -1.95
CDX2Q99626 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.84□□□□□ -1.95
CDX2Q99626 OR8L1P-201ENST00000534005 955 ntBASIC2.84□□□□□ -1.95
CDX2Q99626 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.84□□□□□ -1.95
CDX2Q99626 OR4K7P-201ENST00000580232 945 ntBASIC2.84□□□□□ -1.95
CDX2Q99626 AC008687.2-201ENST00000597865 520 ntBASIC2.84□□□□□ -1.95
CDX2Q99626 AL021368.1-201ENST00000607490 540 ntBASIC2.84□□□□□ -1.95
CDX2Q99626 AC021851.1-201ENST00000608537 1082 ntBASIC2.84□□□□□ -1.95
CDX2Q99626 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.95
CDX2Q99626 AC104237.2-201ENST00000612456 443 ntBASIC2.84□□□□□ -1.95
CDX2Q99626 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
CDX2Q99626 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
CDX2Q99626 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
CDX2Q99626 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CDX2Q99626 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CDX2Q99626 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CDX2Q99626 AC107081.3-201ENST00000612715 2034 ntBASIC2.83□□□□□ -1.96
CDX2Q99626 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.83□□□□□ -1.96
CDX2Q99626 MTND5P24-201ENST00000438892 1767 ntBASIC2.83□□□□□ -1.96
CDX2Q99626 SNORA7.2-201ENST00000364446 145 ntBASIC2.83□□□□□ -1.96
CDX2Q99626 SNORA51.12-201ENST00000384448 134 ntBASIC2.83□□□□□ -1.96
CDX2Q99626 RNU6-1151P-201ENST00000384684 107 ntBASIC2.83□□□□□ -1.96
CDX2Q99626 Y_RNA.595-201ENST00000410403 105 ntBASIC2.83□□□□□ -1.96
CDX2Q99626 RPS15AP40-201ENST00000419621 391 ntBASIC2.83□□□□□ -1.96
CDX2Q99626 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.83□□□□□ -1.96
CDX2Q99626 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.83□□□□□ -1.96
CDX2Q99626 RAB11AP1-201ENST00000442978 646 ntBASIC2.83□□□□□ -1.96
CDX2Q99626 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC2.83□□□□□ -1.96
CDX2Q99626 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CDX2Q99626 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.83□□□□□ -1.96
CDX2Q99626 OR6K1P-201ENST00000456766 971 ntBASIC2.83□□□□□ -1.96
CDX2Q99626 VN1R17P-201ENST00000472048 1090 ntBASIC2.83□□□□□ -1.96
CDX2Q99626 AC108860.1-201ENST00000484521 383 ntBASIC2.83□□□□□ -1.96
CDX2Q99626 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.83□□□□□ -1.96
CDX2Q99626 MTND3P24-201ENST00000506306 329 ntBASIC2.83□□□□□ -1.96
CDX2Q99626 MTND4LP22-201ENST00000508209 276 ntBASIC2.83□□□□□ -1.96
CDX2Q99626 AC108729.3-201ENST00000513484 108 ntBASIC2.83□□□□□ -1.96
CDX2Q99626 SCARNA20.6-201ENST00000517251 106 ntBASIC2.83□□□□□ -1.96
CDX2Q99626 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.83□□□□□ -1.96
CDX2Q99626 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.83□□□□□ -1.96
CDX2Q99626 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms