Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AP001992.1-205ENST00000462248 379 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 AC012181.1-201ENST00000479895 423 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 RN7SL499P-201ENST00000481141 276 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 AC068724.1-201ENST00000487100 792 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 AC026414.1-201ENST00000504046 698 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 BOLA3P3-201ENST00000505182 232 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 AC004062.1-201ENST00000509926 645 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.8□□□□□ -1.96
COL21A1Q96P44 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.8□□□□□ -1.96
COL21A1Q96P44 MTCYBP27-201ENST00000555160 670 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.8□□□□□ -1.96
COL21A1Q96P44 SNORD39.3-201ENST00000584451 71 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.8□□□□□ -1.96
COL21A1Q96P44 AC006539.2-201ENST00000601729 572 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
COL21A1Q96P44 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.8□□□□□ -1.96
COL21A1Q96P44 AC078880.5-201ENST00000617845 421 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 AC007318.2-201ENST00000620999 243 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.8□□□□□ -1.96
COL21A1Q96P44 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.8□□□□□ -1.96
COL21A1Q96P44 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.8□□□□□ -1.96
COL21A1Q96P44 AC026634.1-201ENST00000634369 198 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 LRRC77P-213ENST00000637727 880 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
COL21A1Q96P44 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
COL21A1Q96P44 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.8□□□□□ -1.96
COL21A1Q96P44 ZNF833P-201ENST00000424938 1494 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
COL21A1Q96P44 RNU6-989P-201ENST00000362756 107 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 RNU6-839P-201ENST00000363347 108 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 RNU6-207P-201ENST00000384137 107 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 SNORA54-201ENST00000384281 123 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 SNORD116-23-201ENST00000384645 92 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 MIR128-1-201ENST00000384921 82 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 MIR181B1-201ENST00000385240 110 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
COL21A1Q96P44 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 RNU2-72P-201ENST00000411175 163 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.79□□□□□ -1.96
COL21A1Q96P44 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.79□□□□□ -1.96
COL21A1Q96P44 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
COL21A1Q96P44 TRIM60P18-201ENST00000441518 828 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.79□□□□□ -1.96
COL21A1Q96P44 AC104308.1-201ENST00000454621 333 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 RPL21P41-201ENST00000459863 264 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 RPL27AP5-201ENST00000469428 449 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.79□□□□□ -1.96
COL21A1Q96P44 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
COL21A1Q96P44 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.79□□□□□ -1.96
COL21A1Q96P44 MTND2P31-201ENST00000512602 616 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 RNA5SP76-201ENST00000516277 87 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
COL21A1Q96P44 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
COL21A1Q96P44 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.79□□□□□ -1.96
COL21A1Q96P44 MTND4LP25-201ENST00000570218 163 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 AC010653.1-201ENST00000571108 881 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 AP001542.2-201ENST00000593141 364 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 MTATP6P2-201ENST00000603319 678 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 RPAP2P1-201ENST00000603626 1168 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 AC116312.1-201ENST00000606841 314 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.79□□□□□ -1.96
COL21A1Q96P44 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.79□□□□□ -1.96
COL21A1Q96P44 AC006329.2-201ENST00000611491 394 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 AL162274.2-201ENST00000614406 332 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.79□□□□□ -1.96
COL21A1Q96P44 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.79□□□□□ -1.96
COL21A1Q96P44 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.79□□□□□ -1.96
COL21A1Q96P44 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
COL21A1Q96P44 NUP58P1-201ENST00000502546 1738 ntBASIC2.79□□□□□ -1.96
COL21A1Q96P44 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
COL21A1Q96P44 AL049780.3-201ENST00000624612 1583 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
COL21A1Q96P44 GNG5P1-201ENST00000255500 204 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 U3.26-201ENST00000391236 204 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 AL138885.1-201ENST00000405921 675 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.78□□□□□ -1.96
COL21A1Q96P44 AL451074.5-201ENST00000415894 435 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.78□□□□□ -1.96
COL21A1Q96P44 AL035410.1-201ENST00000427409 427 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 AC005345.1-201ENST00000431868 217 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.78□□□□□ -1.96
COL21A1Q96P44 RPL21P2-201ENST00000440049 481 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 AL096829.2-201ENST00000446582 742 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 MTND2P19-201ENST00000449129 1012 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 AC093392.2-201ENST00000450682 337 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.78□□□□□ -1.96
COL21A1Q96P44 SSXP4-201ENST00000451349 245 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.78□□□□□ -1.96
COL21A1Q96P44 NECAP1P2-201ENST00000455668 727 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.78□□□□□ -1.96
COL21A1Q96P44 PABPC1P3-201ENST00000469174 459 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 RPL23AP11-201ENST00000475260 469 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 OR2A20P-203ENST00000498397 1268 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 PRELID3BP6-201ENST00000503839 571 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 AC011352.3-201ENST00000505162 593 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 AC091860.1-201ENST00000505723 432 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.78□□□□□ -1.96
COL21A1Q96P44 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.78□□□□□ -1.96
COL21A1Q96P44 RNU6-334P-201ENST00000517072 102 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms