Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 Y_RNA.167-201ENST00000363735 109 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 RN7SKP113-201ENST00000363891 295 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 RNU6-188P-201ENST00000364207 107 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 RNA5SP455-201ENST00000365190 119 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 SNORD115-7-201ENST00000365306 82 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 RNU6-432P-201ENST00000384196 109 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 SNORA24.1-201ENST00000384401 135 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 UBE2V1P2-201ENST00000397758 440 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 AL592114.1-201ENST00000403842 483 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 MIR548K-201ENST00000408406 116 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 AC114491.1-201ENST00000416095 246 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 AC009238.2-201ENST00000431026 355 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 RPL35AP22-201ENST00000436855 335 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 PRPF38AP2-201ENST00000438179 851 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 BX276092.4-201ENST00000452056 248 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 AC006967.1-201ENST00000467608 589 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 COX6B1P2-201ENST00000489624 230 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 RN7SL244P-201ENST00000493405 297 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 AC135721.1-201ENST00000497954 479 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 CCDC34P1-201ENST00000507441 517 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 AC004980.4-201ENST00000513375 203 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 AC005798.1-201ENST00000513715 387 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 RNU6-1088P-201ENST00000516850 104 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 RN7SKP147-201ENST00000517154 244 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 AP000889.2-201ENST00000532684 490 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 AP000763.2-201ENST00000540641 163 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 AL163153.1-201ENST00000554223 283 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 DPPA3P3-201ENST00000603842 430 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 EIF3FP1-201ENST00000613970 806 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 MIR7155-201ENST00000615925 56 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 AC007546.1-201ENST00000619452 559 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 AL161637.1-201ENST00000622380 412 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 RN7SKP224-201ENST00000364140 325 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 RNU6-61P-201ENST00000365528 109 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 AC074085.1-201ENST00000413598 418 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 AC245054.2-201ENST00000415639 319 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 DDX39BP1-205ENST00000422507 192 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 RPS12P5-201ENST00000423449 371 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 MTND3P2-201ENST00000438452 342 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 AC020550.1-201ENST00000447385 163 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 AC005008.1-201ENST00000456151 612 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 RNU7-152P-201ENST00000458982 64 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 SNORD97-201ENST00000459187 142 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 RPL35AP28-201ENST00000459730 331 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 AC091180.1-201ENST00000462104 372 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 AC004801.2-202ENST00000463559 283 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 AC106872.2-201ENST00000494303 480 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 RN7SKP277-201ENST00000516895 283 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 IGKV2D-36-201ENST00000518643 226 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 AL137161.1-201ENST00000532231 390 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 AC022884.2-201ENST00000578535 580 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 MIR4293-201ENST00000584305 78 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 AC006116.10-201ENST00000591836 581 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 AC016925.2-201ENST00000605108 242 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 AC093799.2-201ENST00000610062 578 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 AC006329.2-201ENST00000611491 394 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 AL353662.3-201ENST00000625131 237 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms