Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 RBMY1KP-201ENST00000423480 476 ntBASIC4.24□□□□□ -1.73
CCDC138Q96M89 DNAJC19P7-201ENST00000428811 344 ntBASIC4.24□□□□□ -1.73
CCDC138Q96M89 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC138Q96M89 VN1R108P-201ENST00000431580 830 ntBASIC4.24□□□□□ -1.73
CCDC138Q96M89 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC138Q96M89 PGBD4P3-201ENST00000440731 581 ntBASIC4.24□□□□□ -1.73
CCDC138Q96M89 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC138Q96M89 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC138Q96M89 MTCO2P7-201ENST00000446518 666 ntBASIC4.24□□□□□ -1.73
CCDC138Q96M89 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC138Q96M89 RPL35AP15-201ENST00000468042 339 ntBASIC4.24□□□□□ -1.73
CCDC138Q96M89 RAP1BP2-201ENST00000478270 544 ntBASIC4.24□□□□□ -1.73
CCDC138Q96M89 AC092451.1-201ENST00000480211 153 ntBASIC4.24□□□□□ -1.73
CCDC138Q96M89 RN7SL810P-201ENST00000493031 276 ntBASIC4.24□□□□□ -1.73
CCDC138Q96M89 NIPA2P2-201ENST00000496376 1083 ntBASIC4.24□□□□□ -1.73
CCDC138Q96M89 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC138Q96M89 AC022447.1-201ENST00000515358 464 ntBASIC4.24□□□□□ -1.73
CCDC138Q96M89 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC138Q96M89 OR5M7P-201ENST00000526140 972 ntBASIC4.24□□□□□ -1.73
CCDC138Q96M89 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC138Q96M89 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC138Q96M89 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.24□□□□□ -1.73
CCDC138Q96M89 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC138Q96M89 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC138Q96M89 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC138Q96M89 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC138Q96M89 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC138Q96M89 AC113403.1-201ENST00000604910 193 ntBASIC4.24□□□□□ -1.73
CCDC138Q96M89 AC131902.3-201ENST00000611767 581 ntBASIC4.24□□□□□ -1.73
CCDC138Q96M89 AC090970.3-201ENST00000612566 866 ntBASIC4.24□□□□□ -1.73
CCDC138Q96M89 AC019278.1-201ENST00000623516 479 ntBASIC4.24□□□□□ -1.73
CCDC138Q96M89 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC138Q96M89 AC068137.4-201ENST00000638485 296 ntBASIC4.24□□□□□ -1.73
CCDC138Q96M89 AC099654.13-201ENST00000639774 207 ntBASIC4.24□□□□□ -1.73
CCDC138Q96M89 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC138Q96M89 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC138Q96M89 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC138Q96M89 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC138Q96M89 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
CCDC138Q96M89 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC138Q96M89 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CCDC138Q96M89 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.24□□□□□ -1.73
CCDC138Q96M89 AC024560.2-201ENST00000507981 1497 ntBASIC4.24□□□□□ -1.73
CCDC138Q96M89 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CCDC138Q96M89 AC018555.1-201ENST00000567548 1980 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC138Q96M89 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC138Q96M89 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC138Q96M89 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
CCDC138Q96M89 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CCDC138Q96M89 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC138Q96M89 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC138Q96M89 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CCDC138Q96M89 MIR331-201ENST00000362302 94 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 RNU5A-8P-201ENST00000364102 114 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC138Q96M89 RNU6-278P-201ENST00000390945 109 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 MRPL42P2-201ENST00000403169 426 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 RNU2-37P-201ENST00000410695 177 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 RAB28P1-201ENST00000411517 641 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 RPS3AP3-201ENST00000411933 242 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC138Q96M89 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC138Q96M89 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC138Q96M89 SPA17P1-201ENST00000416656 452 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.23□□□□□ -1.73
CCDC138Q96M89 AC009480.2-201ENST00000422916 432 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 PPP1R11P2-201ENST00000423543 382 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC138Q96M89 MTATP6P4-201ENST00000427725 675 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC138Q96M89 PHBP16-201ENST00000446318 950 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC138Q96M89 ABCF2P2-201ENST00000450549 296 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 MTND1P27-201ENST00000451117 902 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 AC009220.1-201ENST00000451614 275 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC138Q96M89 AC108059.3-201ENST00000456388 214 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 CFTRP1-201ENST00000456646 183 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 RN7SL98P-201ENST00000462271 300 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 RPL21P104-201ENST00000464143 478 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 AC114967.1-201ENST00000504890 259 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
CCDC138Q96M89 PARP4P3-201ENST00000510265 317 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 AC079140.3-201ENST00000511111 550 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 MTND3P5-201ENST00000512798 333 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC138Q96M89 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
CCDC138Q96M89 IGKV2D-23-201ENST00000518179 286 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.23□□□□□ -1.73
CCDC138Q96M89 AP002963.1-201ENST00000530590 184 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
CCDC138Q96M89 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC138Q96M89 AL133153.1-201ENST00000557756 303 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC138Q96M89 RPL23AP87-202ENST00000573039 466 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 MIR3146-201ENST00000580367 79 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 MIR3611-201ENST00000584484 83 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms