Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AL450472.3-201ENST00000615578 367 ntBASIC3.39□□□□□ -1.87
USP47Q96K76 AP003400.6-201ENST00000624698 740 ntBASIC3.39□□□□□ -1.87
USP47Q96K76 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
USP47Q96K76 SEC63P2-201ENST00000503863 1939 ntBASIC3.39□□□□□ -1.87
USP47Q96K76 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.39□□□□□ -1.87
USP47Q96K76 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
USP47Q96K76 SNORA51.12-201ENST00000384448 134 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 RNU6-796P-201ENST00000391086 107 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
USP47Q96K76 CYCSP45-201ENST00000402289 315 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 FAT1P1-201ENST00000406588 507 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 RNA5SP425-201ENST00000410336 112 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 UBE2V1P11-201ENST00000411559 285 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.38□□□□□ -1.87
USP47Q96K76 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.38□□□□□ -1.87
USP47Q96K76 AC073310.1-201ENST00000423226 1033 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
USP47Q96K76 RPS27AP9-201ENST00000477681 438 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 AC092451.1-201ENST00000480211 153 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 AC108860.1-201ENST00000484521 383 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.38□□□□□ -1.87
USP47Q96K76 AC016065.2-201ENST00000514530 444 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.38□□□□□ -1.87
USP47Q96K76 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.38□□□□□ -1.87
USP47Q96K76 MIR4504-201ENST00000577413 92 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 AC008687.2-201ENST00000597865 520 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 AC091488.1-201ENST00000604239 660 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 AC099778.2-201ENST00000610904 211 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.38□□□□□ -1.87
USP47Q96K76 AC103798.2-201ENST00000624292 632 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
USP47Q96K76 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
USP47Q96K76 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
USP47Q96K76 MTND4P21-201ENST00000453886 1357 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
USP47Q96K76 RNU6-1243P-201ENST00000364028 107 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
USP47Q96K76 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
USP47Q96K76 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
USP47Q96K76 UBE2V1P15-201ENST00000407776 448 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 RNU6-272P-201ENST00000411028 104 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.38□□□□□ -1.87
USP47Q96K76 SAR1AP4-201ENST00000429225 591 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 AC104389.3-201ENST00000445629 235 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.38□□□□□ -1.87
USP47Q96K76 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
USP47Q96K76 AC104108.1-201ENST00000509930 412 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 TMEM248P1-201ENST00000510579 951 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 AP004242.1-201ENST00000533701 349 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.38□□□□□ -1.87
USP47Q96K76 AL731537.2-201ENST00000561565 951 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.38□□□□□ -1.87
USP47Q96K76 AC018754.1-201ENST00000607486 925 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 FRG1HP-204ENST00000617940 757 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 AC073569.3-201ENST00000619055 682 ntBASIC3.38□□□□□ -1.87
USP47Q96K76 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.38□□□□□ -1.87
USP47Q96K76 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.37□□□□□ -1.87
USP47Q96K76 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USP47Q96K76 AL157700.1-201ENST00000561973 1432 ntBASIC3.37□□□□□ -1.87
USP47Q96K76 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.37□□□□□ -1.87
USP47Q96K76 FRG1BP-201ENST00000278882 761 ntBASIC3.37□□□□□ -1.87
USP47Q96K76 RNU6-1339P-201ENST00000363574 91 ntBASIC3.37□□□□□ -1.87
USP47Q96K76 SNORA25.6-201ENST00000364121 118 ntBASIC3.37□□□□□ -1.87
USP47Q96K76 SNORA41-201ENST00000384675 132 ntBASIC3.37□□□□□ -1.87
USP47Q96K76 DSTNP4-201ENST00000399472 474 ntBASIC3.37□□□□□ -1.87
USP47Q96K76 AL135786.1-201ENST00000415892 214 ntBASIC3.37□□□□□ -1.87
USP47Q96K76 AC005517.2-201ENST00000424673 553 ntBASIC3.37□□□□□ -1.87
USP47Q96K76 RPL36P19-201ENST00000430744 301 ntBASIC3.37□□□□□ -1.87
USP47Q96K76 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.37□□□□□ -1.87
USP47Q96K76 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.37□□□□□ -1.87
USP47Q96K76 NPM1P49-201ENST00000448027 714 ntBASIC3.37□□□□□ -1.87
USP47Q96K76 RN7SL499P-201ENST00000481141 276 ntBASIC3.37□□□□□ -1.87
USP47Q96K76 LINC00888-204ENST00000487386 421 ntBASIC3.37□□□□□ -1.87
USP47Q96K76 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.37□□□□□ -1.87
USP47Q96K76 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.37□□□□□ -1.87
USP47Q96K76 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.37□□□□□ -1.87
USP47Q96K76 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.37□□□□□ -1.87
USP47Q96K76 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.37□□□□□ -1.87
USP47Q96K76 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
USP47Q96K76 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.37□□□□□ -1.87
USP47Q96K76 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.37□□□□□ -1.87
USP47Q96K76 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.37□□□□□ -1.87
USP47Q96K76 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.37□□□□□ -1.87
USP47Q96K76 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.37□□□□□ -1.87
USP47Q96K76 AC007687.1-201ENST00000602704 304 ntBASIC3.37□□□□□ -1.87
USP47Q96K76 AL163051.2-201ENST00000618976 735 ntBASIC3.37□□□□□ -1.87
USP47Q96K76 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USP47Q96K76 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
USP47Q96K76 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.36□□□□□ -1.87
USP47Q96K76 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
USP47Q96K76 DEFA7P-201ENST00000382676 285 ntBASIC3.36□□□□□ -1.87
USP47Q96K76 AC073264.1-201ENST00000411508 416 ntBASIC3.36□□□□□ -1.87
USP47Q96K76 RPL7P10-201ENST00000417407 739 ntBASIC3.36□□□□□ -1.87
USP47Q96K76 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.36□□□□□ -1.87
USP47Q96K76 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.36□□□□□ -1.87
USP47Q96K76 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
USP47Q96K76 snoU13.23-201ENST00000458863 104 ntBASIC3.36□□□□□ -1.87
USP47Q96K76 RPS20P22-201ENST00000473700 357 ntBASIC3.36□□□□□ -1.87
USP47Q96K76 OR52A4P-202ENST00000481634 799 ntBASIC3.36□□□□□ -1.87
USP47Q96K76 NCOR1P1-202ENST00000486162 291 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms