Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 AC017037.2-201ENST00000513850 890 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 MTCO2P32-201ENST00000514865 403 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 NDUFA5P2-201ENST00000519723 344 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 SNRPGP16-201ENST00000533275 226 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 AC007834.2-201ENST00000536310 343 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 OSBPL9P5-201ENST00000542581 171 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 AC011602.1-201ENST00000546484 331 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 AC084824.1-201ENST00000550917 1005 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 TRAV37-201ENST00000553906 342 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 AL163153.1-201ENST00000554223 283 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 AC009094.1-201ENST00000564443 426 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 FAM60BP-201ENST00000578364 658 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 AC064807.4-201ENST00000607201 407 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 MIR6758-201ENST00000620653 63 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RFT1Q96AA3 AC079684.1-201ENST00000621405 437 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RFT1Q96AA3 AC087359.1-201ENST00000508335 1740 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 MFSD8-236ENST00000641509 4050 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 AL079305.1-201ENST00000623159 3008 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RFT1Q96AA3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RFT1Q96AA3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 AC126755.2-208ENST00000327792 462 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RFT1Q96AA3 AC138969.1-213ENST00000331436 462 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RFT1Q96AA3 MIR135A2-201ENST00000384854 100 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 AL022722.2-201ENST00000402519 180 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 AL136372.1-201ENST00000403060 228 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 RNA5SP129-201ENST00000410276 118 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 AC009518.2-201ENST00000418056 731 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 AC004866.2-201ENST00000438285 481 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 AL359073.1-201ENST00000448036 403 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 RPL23AP31-201ENST00000456160 467 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 snoU13.8-201ENST00000458890 104 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 OR9M1P-201ENST00000459641 921 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 AC010401.1-201ENST00000463867 348 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 FAM172BP-201ENST00000487497 1089 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 AC092185.1-201ENST00000491371 97 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 AC024589.1-201ENST00000512207 263 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 MTCO3P28-201ENST00000513351 515 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 SNORA31.8-201ENST00000516327 108 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 RNU6-714P-201ENST00000516963 103 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 MTCO1P49-201ENST00000523429 802 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 AC239860.2-201ENST00000525886 270 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 AC008011.1-201ENST00000545989 227 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 AC025884.1-201ENST00000556034 378 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 BNIP3P5-201ENST00000562290 498 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 AC005951.1-201ENST00000576706 485 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 VN1R92P-201ENST00000598511 928 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 AC021171.1-201ENST00000603137 706 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 AC090186.1-201ENST00000605991 572 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 AC092354.2-201ENST00000607786 514 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 TUG1_1.1-201ENST00000610654 145 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 AC091304.6-201ENST00000619761 202 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 AC112484.5-201ENST00000624189 228 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 AC079228.1-201ENST00000624774 1049 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.26□□□□□ -1.89
RFT1Q96AA3 TAB3P1-202ENST00000452645 1634 ntBASIC3.26□□□□□ -1.89
RFT1Q96AA3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RFT1Q96AA3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms