Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC015813.4-201ENST00000610469 179 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 AC091834.1-201ENST00000614543 472 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 AC004825.2-201ENST00000616634 455 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 AC068831.8-201ENST00000620171 435 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 AC068792.1-201ENST00000621354 417 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 AC099654.13-201ENST00000639774 207 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 MAPK10-253ENST00000641010 4072 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HPS3Q969F9 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.59□□□□□ -1.68
HPS3Q969F9 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HPS3Q969F9 MARK2P15-201ENST00000432204 2186 ntBASIC4.58□□□□□ -1.68
HPS3Q969F9 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HPS3Q969F9 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.58□□□□□ -1.68
HPS3Q969F9 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HPS3Q969F9 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.58□□□□□ -1.68
HPS3Q969F9 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HPS3Q969F9 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
HPS3Q969F9 MIR383-201ENST00000362257 73 ntBASIC4.58□□□□□ -1.68
HPS3Q969F9 RNY4P34-201ENST00000364779 95 ntBASIC4.58□□□□□ -1.68
HPS3Q969F9 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.58□□□□□ -1.68
HPS3Q969F9 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HPS3Q969F9 Y_RNA.582-201ENST00000391023 95 ntBASIC4.58□□□□□ -1.68
HPS3Q969F9 AC078974.1-201ENST00000411597 223 ntBASIC4.58□□□□□ -1.68
HPS3Q969F9 AC092447.6-201ENST00000414578 210 ntBASIC4.58□□□□□ -1.68
HPS3Q969F9 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.58□□□□□ -1.68
HPS3Q969F9 C1DP2-201ENST00000418167 426 ntBASIC4.58□□□□□ -1.68
HPS3Q969F9 OR5BE1P-201ENST00000425977 939 ntBASIC4.58□□□□□ -1.68
HPS3Q969F9 BTF3P10-201ENST00000433415 495 ntBASIC4.58□□□□□ -1.68
HPS3Q969F9 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.58□□□□□ -1.68
HPS3Q969F9 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.58□□□□□ -1.68
HPS3Q969F9 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.58□□□□□ -1.68
HPS3Q969F9 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.58□□□□□ -1.68
HPS3Q969F9 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.58□□□□□ -1.68
HPS3Q969F9 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.58□□□□□ -1.68
HPS3Q969F9 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.58□□□□□ -1.68
HPS3Q969F9 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.58□□□□□ -1.68
HPS3Q969F9 PARP4P3-201ENST00000510265 317 ntBASIC4.58□□□□□ -1.68
HPS3Q969F9 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HPS3Q969F9 AC099522.1-202ENST00000514718 367 ntBASIC4.58□□□□□ -1.68
HPS3Q969F9 RNA5SP154-201ENST00000516193 111 ntBASIC4.58□□□□□ -1.68
HPS3Q969F9 Y_RNA.672-201ENST00000516289 104 ntBASIC4.58□□□□□ -1.68
HPS3Q969F9 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.58□□□□□ -1.68
HPS3Q969F9 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.58□□□□□ -1.68
HPS3Q969F9 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.58□□□□□ -1.68
HPS3Q969F9 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.58□□□□□ -1.68
HPS3Q969F9 AC023575.1-201ENST00000580510 358 ntBASIC4.58□□□□□ -1.68
HPS3Q969F9 RN7SL600P-201ENST00000581811 299 ntBASIC4.58□□□□□ -1.68
HPS3Q969F9 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.58□□□□□ -1.68
HPS3Q969F9 NRBF2P1-201ENST00000587407 859 ntBASIC4.58□□□□□ -1.68
HPS3Q969F9 AL445567.2-201ENST00000618935 498 ntBASIC4.58□□□□□ -1.68
HPS3Q969F9 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.58□□□□□ -1.68
HPS3Q969F9 PISRT1-201ENST00000626175 531 ntBASIC4.58□□□□□ -1.68
HPS3Q969F9 AC110994.2-201ENST00000635481 492 ntBASIC4.58□□□□□ -1.68
HPS3Q969F9 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.58□□□□□ -1.68
HPS3Q969F9 OR5BE1P-202ENST00000641168 1176 ntBASIC4.58□□□□□ -1.68
HPS3Q969F9 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HPS3Q969F9 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.58□□□□□ -1.68
HPS3Q969F9 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HPS3Q969F9 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HPS3Q969F9 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HPS3Q969F9 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HPS3Q969F9 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
HPS3Q969F9 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
HPS3Q969F9 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.57□□□□□ -1.68
HPS3Q969F9 MTCO1P9-201ENST00000505577 1534 ntBASIC4.57□□□□□ -1.68
HPS3Q969F9 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
HPS3Q969F9 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HPS3Q969F9 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
HPS3Q969F9 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HPS3Q969F9 MIR448-201ENST00000362131 111 ntBASIC4.57□□□□□ -1.68
HPS3Q969F9 Y_RNA.3-201ENST00000362331 103 ntBASIC4.57□□□□□ -1.68
HPS3Q969F9 RNU6-259P-201ENST00000383999 107 ntBASIC4.57□□□□□ -1.68
HPS3Q969F9 RNU6-114P-201ENST00000384704 105 ntBASIC4.57□□□□□ -1.68
HPS3Q969F9 MIR1193-201ENST00000408109 78 ntBASIC4.57□□□□□ -1.68
HPS3Q969F9 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.57□□□□□ -1.68
HPS3Q969F9 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.57□□□□□ -1.68
HPS3Q969F9 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.57□□□□□ -1.68
HPS3Q969F9 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.57□□□□□ -1.68
HPS3Q969F9 AC004975.1-201ENST00000428733 208 ntBASIC4.57□□□□□ -1.68
HPS3Q969F9 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HPS3Q969F9 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.57□□□□□ -1.68
HPS3Q969F9 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.57□□□□□ -1.68
HPS3Q969F9 GAPDHP17-201ENST00000449858 1001 ntBASIC4.57□□□□□ -1.68
HPS3Q969F9 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.57□□□□□ -1.68
HPS3Q969F9 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.57□□□□□ -1.68
HPS3Q969F9 UQCRHP4-201ENST00000471686 272 ntBASIC4.57□□□□□ -1.68
HPS3Q969F9 MTND1P3-201ENST00000484956 952 ntBASIC4.57□□□□□ -1.68
HPS3Q969F9 AL358832.1-201ENST00000497800 389 ntBASIC4.57□□□□□ -1.68
HPS3Q969F9 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.57□□□□□ -1.68
HPS3Q969F9 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.57□□□□□ -1.68
HPS3Q969F9 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.57□□□□□ -1.68
HPS3Q969F9 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HPS3Q969F9 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.57□□□□□ -1.68
HPS3Q969F9 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.57□□□□□ -1.68
HPS3Q969F9 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.57□□□□□ -1.68
HPS3Q969F9 AC009063.1-201ENST00000563342 702 ntBASIC4.57□□□□□ -1.68
HPS3Q969F9 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.57□□□□□ -1.68
HPS3Q969F9 AC090616.5-202ENST00000582111 297 ntBASIC4.57□□□□□ -1.68
HPS3Q969F9 MIR3939-201ENST00000582614 106 ntBASIC4.57□□□□□ -1.68
HPS3Q969F9 HMGN1P30-201ENST00000589286 268 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms