Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.24□□□□□ -1.57
BRF1Q92994 RPEP3-201ENST00000425462 676 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 PSMA6P3-201ENST00000428242 164 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 RPL23AP30-201ENST00000432419 501 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 AC105402.2-201ENST00000438503 358 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 DDX3P2-201ENST00000446138 111 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.24□□□□□ -1.57
BRF1Q92994 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.24□□□□□ -1.57
BRF1Q92994 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.24□□□□□ -1.57
BRF1Q92994 RNU6-410P-201ENST00000517006 107 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC5.24□□□□□ -1.57
BRF1Q92994 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.24□□□□□ -1.57
BRF1Q92994 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC5.24□□□□□ -1.57
BRF1Q92994 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
BRF1Q92994 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.24□□□□□ -1.57
BRF1Q92994 AC098848.2-201ENST00000588023 330 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 AP001429.1-201ENST00000602568 530 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 AC068790.3-201ENST00000602988 553 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 MIR1302-2-201ENST00000607096 138 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 OR6R2P-201ENST00000609216 300 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 PART1_1.1-201ENST00000611761 217 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.24□□□□□ -1.57
BRF1Q92994 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.24□□□□□ -1.57
BRF1Q92994 uc_338.12-201ENST00000616344 181 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 MIR6730-201ENST00000622213 67 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 AC007546.2-201ENST00000623996 360 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 AC011460.1-201ENST00000636268 1834 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
BRF1Q92994 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
BRF1Q92994 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.24□□□□□ -1.57
BRF1Q92994 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
BRF1Q92994 A2MP1-204ENST00000566278 4130 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
BRF1Q92994 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
BRF1Q92994 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
BRF1Q92994 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.23□□□□□ -1.57
BRF1Q92994 FRG1CP-201ENST00000358464 769 ntBASIC5.23□□□□□ -1.57
BRF1Q92994 RNU1-130P-201ENST00000363930 160 ntBASIC5.23□□□□□ -1.57
BRF1Q92994 RNA5SP505-201ENST00000364748 108 ntBASIC5.23□□□□□ -1.57
BRF1Q92994 RNU6-1227P-201ENST00000383981 107 ntBASIC5.23□□□□□ -1.57
BRF1Q92994 AL136116.1-201ENST00000403591 381 ntBASIC5.23□□□□□ -1.57
BRF1Q92994 RPS15AP12-201ENST00000419498 388 ntBASIC5.23□□□□□ -1.57
BRF1Q92994 SRIP2-201ENST00000428470 166 ntBASIC5.23□□□□□ -1.57
BRF1Q92994 AL365400.1-201ENST00000431854 640 ntBASIC5.23□□□□□ -1.57
BRF1Q92994 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
BRF1Q92994 AC093156.1-201ENST00000440382 670 ntBASIC5.23□□□□□ -1.57
BRF1Q92994 ARL2BPP10-201ENST00000446487 531 ntBASIC5.23□□□□□ -1.57
BRF1Q92994 RPL7P52-201ENST00000449200 742 ntBASIC5.23□□□□□ -1.57
BRF1Q92994 RN7SL41P-201ENST00000476144 297 ntBASIC5.23□□□□□ -1.57
BRF1Q92994 AC021382.1-201ENST00000483523 359 ntBASIC5.23□□□□□ -1.57
BRF1Q92994 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5.23□□□□□ -1.57
BRF1Q92994 AC008897.1-201ENST00000494006 347 ntBASIC5.23□□□□□ -1.57
BRF1Q92994 RPL38P4-201ENST00000502376 214 ntBASIC5.23□□□□□ -1.57
BRF1Q92994 TMEM248P1-201ENST00000510579 951 ntBASIC5.23□□□□□ -1.57
BRF1Q92994 AC022690.1-201ENST00000526681 550 ntBASIC5.23□□□□□ -1.57
BRF1Q92994 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.23□□□□□ -1.57
BRF1Q92994 AC011611.1-201ENST00000552179 197 ntBASIC5.23□□□□□ -1.57
BRF1Q92994 AC124068.1-201ENST00000563131 678 ntBASIC5.23□□□□□ -1.57
BRF1Q92994 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.23□□□□□ -1.57
BRF1Q92994 AC008782.1-201ENST00000603386 430 ntBASIC5.23□□□□□ -1.57
BRF1Q92994 Z98200.1-201ENST00000607298 470 ntBASIC5.23□□□□□ -1.57
BRF1Q92994 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.23□□□□□ -1.57
BRF1Q92994 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.23□□□□□ -1.57
BRF1Q92994 AC006020.1-201ENST00000420179 1854 ntBASIC5.23□□□□□ -1.57
BRF1Q92994 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
BRF1Q92994 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
BRF1Q92994 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
BRF1Q92994 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
BRF1Q92994 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
BRF1Q92994 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
BRF1Q92994 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
BRF1Q92994 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
BRF1Q92994 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
BRF1Q92994 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
BRF1Q92994 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
BRF1Q92994 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.22□□□□□ -1.57
BRF1Q92994 OR51H2P-202ENST00000641424 3046 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.22□□□□□ -1.57
BRF1Q92994 MFSD8-216ENST00000641147 4009 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
BRF1Q92994 RNA5SP307-201ENST00000362863 116 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 RNU6-249P-201ENST00000363016 102 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 RNU6-97P-201ENST00000363387 104 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
BRF1Q92994 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
BRF1Q92994 MIR1-2-201ENST00000384961 85 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 RPS20P14-201ENST00000412545 360 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 RPL31P2-201ENST00000413849 377 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 AL590139.1-201ENST00000416267 400 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC5.22□□□□□ -1.57
BRF1Q92994 RPL35AP12-201ENST00000425362 338 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 EZH2P1-201ENST00000431167 291 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 UBE2V1P13-201ENST00000436983 439 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.22□□□□□ -1.57
BRF1Q92994 AL162591.2-201ENST00000449634 317 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 CACYBPP2-201ENST00000453625 678 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.22□□□□□ -1.57
BRF1Q92994 RNU7-63P-201ENST00000459054 62 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms