Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AL356421.1-201ENST00000403255 413 ntBASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 OR2AS1P-201ENST00000427827 319 ntBASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 HMGB1P9-201ENST00000429856 646 ntBASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 BX323845.1-201ENST00000432417 179 ntBASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 AL451139.1-201ENST00000434718 346 ntBASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 AC112498.1-201ENST00000444401 332 ntBASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 HMGN3P1-201ENST00000453847 193 ntBASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 MTCO3P2-201ENST00000457365 171 ntBASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 RN7SL814P-201ENST00000487715 300 ntBASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 AC108043.1-201ENST00000512696 574 ntBASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 RNU6-488P-201ENST00000515918 99 ntBASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 AC063949.1-201ENST00000552900 865 ntBASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 MIR5583-1-201ENST00000580941 59 ntBASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 MIR4737-201ENST00000583979 81 ntBASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 PRPF19P1-201ENST00000584766 898 ntBASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 AL354984.3-201ENST00000604803 325 ntBASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 AC243312.2-201ENST00000623340 601 ntBASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 TCP11X1-202ENST00000622971 1372 ntBASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 SNORD3E-201ENST00000362899 217 ntBASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 Y_RNA.350-201ENST00000365409 98 ntBASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 RNU6-472P-201ENST00000384299 107 ntBASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 SNORA75.6-201ENST00000391318 127 ntBASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 RAC1P6-201ENST00000423911 575 ntBASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 SNRPFP3-201ENST00000457792 225 ntBASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 AC010350.1-201ENST00000504908 231 ntBASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 MRPS33P2-201ENST00000507850 322 ntBASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 TXNP6-201ENST00000510190 310 ntBASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 RNU6-699P-201ENST00000517081 110 ntBASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 HMGN2P47-201ENST00000559378 272 ntBASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 AC040958.1-201ENST00000561102 201 ntBASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 AL512782.1-201ENST00000603093 364 ntBASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.31□□□□□ -1.56
SHKBP1Q8TBC3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 RNU6-450P-201ENST00000364654 107 ntBASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 AL078604.1-201ENST00000404609 466 ntBASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 NDUFS5P1-201ENST00000405668 289 ntBASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 RN7SKP16-201ENST00000410180 299 ntBASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 AC008280.1-201ENST00000418851 412 ntBASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 MED13P1-201ENST00000428342 171 ntBASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 RPL23AP50-201ENST00000434149 455 ntBASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 TIMM9P1-201ENST00000436122 256 ntBASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 RPL23AP74-201ENST00000437246 471 ntBASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 IGHV5-78-201ENST00000450948 295 ntBASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 RN7SL443P-201ENST00000464331 290 ntBASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 RN7SL738P-201ENST00000470264 297 ntBASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 AC008897.1-201ENST00000494006 347 ntBASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 GZMAP1-201ENST00000503054 631 ntBASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 AC116562.3-201ENST00000506136 177 ntBASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 SLC25A15P5-201ENST00000508033 253 ntBASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms