Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 Y_RNA.234-201ENST00000364409 97 ntBASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 RNU6-1168P-201ENST00000390831 104 ntBASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 FAR2P2-201ENST00000413041 594 ntBASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 RPL31P45-201ENST00000419532 356 ntBASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 CBX1P4-201ENST00000439415 457 ntBASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 CEACAMP6-201ENST00000452007 574 ntBASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 snoU13.8-201ENST00000458890 104 ntBASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 AC117503.1-201ENST00000472241 394 ntBASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 AC087385.1-201ENST00000475062 312 ntBASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 AP000797.2-201ENST00000475768 606 ntBASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 AC109925.1-201ENST00000478069 331 ntBASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 RPS4XP1-201ENST00000482189 787 ntBASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 RPS17P5-201ENST00000498293 408 ntBASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 RNU6-911P-201ENST00000516523 104 ntBASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 CYCSP27-201ENST00000527643 293 ntBASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 CBX3P8-201ENST00000532412 525 ntBASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 AC109446.1-201ENST00000566172 220 ntBASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 NANOGP3-201ENST00000605855 286 ntBASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 EIF2AP4-201ENST00000424793 1781 ntBASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
NKX2-3Q8TAU0 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
NKX2-3Q8TAU0 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
NKX2-3Q8TAU0 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
NKX2-3Q8TAU0 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 HSPA8P1-201ENST00000425843 1833 ntBASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 RNA5SP258-201ENST00000362750 119 ntBASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 RNU5E-6P-201ENST00000365574 115 ntBASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 RNU6-417P-201ENST00000384712 107 ntBASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 MIR625-201ENST00000385047 85 ntBASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 SNORD70.1-201ENST00000391007 85 ntBASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 HMGN1P24-201ENST00000412282 298 ntBASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 CYCSP12-201ENST00000437729 300 ntBASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 RPEP5-201ENST00000441137 268 ntBASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 AC016696.1-201ENST00000446949 318 ntBASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 NUTF2P3-201ENST00000448540 384 ntBASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 RN7SL222P-201ENST00000476452 299 ntBASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 RNU6-685P-201ENST00000517088 95 ntBASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 GSTP1P1-201ENST00000548078 319 ntBASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 AL121576.1-201ENST00000556055 276 ntBASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 AP000769.2-201ENST00000602344 396 ntBASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 AC006023.2-201ENST00000609916 167 ntBASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 AL445437.1-201ENST00000623157 3087 ntBASIC6.58□□□□□ -1.36
NKX2-3Q8TAU0 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 RNA5SP305-201ENST00000362665 119 ntBASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 RNY3P11-201ENST00000364153 102 ntBASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 SNORD20-201ENST00000384550 80 ntBASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 SNORA16.2-201ENST00000390991 127 ntBASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 AC108471.1-201ENST00000513977 287 ntBASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 Y_RNA.662-201ENST00000516028 97 ntBASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 MIR4311-201ENST00000580794 100 ntBASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 RPL23AP92-201ENST00000603609 255 ntBASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 Z95327.2-201ENST00000414579 1873 ntBASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms