Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RETREG2Q8NC44 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
RETREG2Q8NC44 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RETREG2Q8NC44 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AC012618.3-205ENST00000637896 1496 ntBASIC5.91□□□□□ -1.46
RETREG2Q8NC44 MAPK10-349ENST00000641767 3661 ntBASIC5.91□□□□□ -1.46
RETREG2Q8NC44 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 RNU4-73P-201ENST00000363164 141 ntBASIC5.91□□□□□ -1.46
RETREG2Q8NC44 RNA5SP123-201ENST00000363244 119 ntBASIC5.91□□□□□ -1.46
RETREG2Q8NC44 XGY1-201ENST00000381172 446 ntBASIC5.91□□□□□ -1.46
RETREG2Q8NC44 MIR600-201ENST00000385007 98 ntBASIC5.91□□□□□ -1.46
RETREG2Q8NC44 RNU6-817P-201ENST00000391083 104 ntBASIC5.91□□□□□ -1.46
RETREG2Q8NC44 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AC008850.1-201ENST00000427546 362 ntBASIC5.91□□□□□ -1.46
RETREG2Q8NC44 RPL7L1P10-201ENST00000427790 463 ntBASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 KCTD9P3-201ENST00000434597 1169 ntBASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AC020550.1-201ENST00000447385 163 ntBASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AL359073.1-201ENST00000448036 403 ntBASIC5.91□□□□□ -1.46
RETREG2Q8NC44 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AL590639.1-201ENST00000456484 337 ntBASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AC021660.1-201ENST00000465006 554 ntBASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AC012158.1-204ENST00000483430 465 ntBASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AC117522.3-201ENST00000507974 584 ntBASIC5.91□□□□□ -1.46
RETREG2Q8NC44 RN7SKP258-201ENST00000517151 304 ntBASIC5.91□□□□□ -1.46
RETREG2Q8NC44 SNORA31.22-201ENST00000517204 135 ntBASIC5.91□□□□□ -1.46
RETREG2Q8NC44 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AC011611.1-201ENST00000552179 197 ntBASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AC011487.3-201ENST00000593607 453 ntBASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AC243960.4-201ENST00000600532 288 ntBASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AC105254.2-201ENST00000603636 436 ntBASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AL138889.2-201ENST00000603883 242 ntBASIC5.91□□□□□ -1.46
RETREG2Q8NC44 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RETREG2Q8NC44 MTND4P35-201ENST00000604257 1375 ntBASIC5.91□□□□□ -1.46
RETREG2Q8NC44 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RETREG2Q8NC44 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
RETREG2Q8NC44 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RETREG2Q8NC44 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RETREG2Q8NC44 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.46
RETREG2Q8NC44 ATP8A2P2-201ENST00000437678 1568 ntBASIC5.9□□□□□ -1.46
RETREG2Q8NC44 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RETREG2Q8NC44 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RETREG2Q8NC44 RNU6-82P-201ENST00000363970 107 ntBASIC5.9□□□□□ -1.46
RETREG2Q8NC44 Y_RNA.529-201ENST00000384586 119 ntBASIC5.9□□□□□ -1.46
RETREG2Q8NC44 Y_RNA.530-201ENST00000384587 101 ntBASIC5.9□□□□□ -1.46
RETREG2Q8NC44 RNU6-550P-201ENST00000391057 101 ntBASIC5.9□□□□□ -1.46
RETREG2Q8NC44 RPS4XP9-201ENST00000405151 780 ntBASIC5.9□□□□□ -1.46
RETREG2Q8NC44 AL356432.1-201ENST00000405809 419 ntBASIC5.9□□□□□ -1.46
RETREG2Q8NC44 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.9□□□□□ -1.46
RETREG2Q8NC44 RN7SKP140-201ENST00000411196 284 ntBASIC5.9□□□□□ -1.46
RETREG2Q8NC44 RPL30P2-201ENST00000414021 291 ntBASIC5.9□□□□□ -1.46
RETREG2Q8NC44 GJA6P-201ENST00000415117 1042 ntBASIC5.9□□□□□ -1.46
RETREG2Q8NC44 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.9□□□□□ -1.46
RETREG2Q8NC44 AL645937.1-202ENST00000421799 937 ntBASIC5.9□□□□□ -1.46
RETREG2Q8NC44 MTCO1P39-201ENST00000426148 480 ntBASIC5.9□□□□□ -1.46
RETREG2Q8NC44 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.9□□□□□ -1.46
RETREG2Q8NC44 HMGB1P27-201ENST00000431429 603 ntBASIC5.9□□□□□ -1.46
RETREG2Q8NC44 TAAR7P-201ENST00000436141 242 ntBASIC5.9□□□□□ -1.46
RETREG2Q8NC44 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RETREG2Q8NC44 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.9□□□□□ -1.46
RETREG2Q8NC44 AC110792.1-201ENST00000491826 472 ntBASIC5.9□□□□□ -1.46
RETREG2Q8NC44 CEACAMP10-202ENST00000495431 496 ntBASIC5.9□□□□□ -1.46
RETREG2Q8NC44 Y_RNA.654-201ENST00000497848 106 ntBASIC5.9□□□□□ -1.46
RETREG2Q8NC44 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.9□□□□□ -1.46
RETREG2Q8NC44 Y_RNA.675-201ENST00000516389 149 ntBASIC5.9□□□□□ -1.46
RETREG2Q8NC44 RN7SKP256-201ENST00000517201 314 ntBASIC5.9□□□□□ -1.46
RETREG2Q8NC44 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.9□□□□□ -1.46
RETREG2Q8NC44 AP006587.4-201ENST00000526053 529 ntBASIC5.9□□□□□ -1.46
RETREG2Q8NC44 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.9□□□□□ -1.46
RETREG2Q8NC44 EDDM3DP-201ENST00000554692 434 ntBASIC5.9□□□□□ -1.46
RETREG2Q8NC44 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms