Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC245036.5-201ENST00000596330 847 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 AC022022.2-201ENST00000602989 360 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 AC097478.2-201ENST00000610572 514 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 MIR7851-201ENST00000610611 160 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 AC087683.2-201ENST00000611384 326 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 AC243773.3-201ENST00000613270 256 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 AC079395.3-201ENST00000615161 484 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 SNORD39.4-201ENST00000620099 78 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 U4.6-201ENST00000621618 127 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AC092435.3-201ENST00000565538 3654 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 RNU6-1122P-201ENST00000384449 107 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 RNU6-83P-201ENST00000384568 112 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 MIR141-201ENST00000384975 95 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 MIR506-201ENST00000384998 124 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 RN7SKP156-201ENST00000410308 342 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 RNA5SP44-201ENST00000410446 133 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 RPL22P18-201ENST00000417197 377 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 HMGB1P49-201ENST00000418882 569 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AC233728.2-201ENST00000425348 757 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 CST9LP2-201ENST00000437612 320 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 HSFY6P-201ENST00000445573 403 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 MTCYBP11-201ENST00000447254 1109 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 TPT1P12-201ENST00000448968 492 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AC009220.1-201ENST00000451614 275 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 USP9YP34-201ENST00000453983 808 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 RPS4XP10-201ENST00000465034 731 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 NDUFA5P9-201ENST00000472609 340 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 RN7SL132P-201ENST00000478131 296 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 VN1R105P-201ENST00000486595 910 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AC023424.2-201ENST00000493479 777 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AC096751.1-202ENST00000502691 1067 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 HMGN1P11-201ENST00000508668 303 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 KLHL2P1-201ENST00000508691 521 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AC079395.1-201ENST00000510981 262 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AC109445.1-201ENST00000512356 383 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 RN7SKP21-201ENST00000516503 220 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 HIGD1AP17-201ENST00000554576 276 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AC009097.3-201ENST00000563557 1018 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 OR4K7P-201ENST00000580232 945 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AC006116.10-201ENST00000591836 581 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AC078899.3-201ENST00000599065 212 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AC008745.1-201ENST00000604064 271 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AP001330.4-201ENST00000604350 154 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AC093424.1-201ENST00000604999 338 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AL158042.1-201ENST00000605338 460 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AC008962.1-201ENST00000605729 304 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AC005962.2-201ENST00000611427 652 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AP000770.2-201ENST00000623694 100 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AC006927.4-201ENST00000639187 543 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 AL049780.3-201ENST00000624612 1583 ntBASIC2.81□□□□□ -1.96
CCDC71LQ8N9Z2 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 RNU1-32P-201ENST00000363937 159 ntBASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 Y_RNA.311-201ENST00000365068 96 ntBASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 SNORD3H-201ENST00000384486 214 ntBASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 RNU6-628P-201ENST00000410675 107 ntBASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 RPS24P7-201ENST00000416921 246 ntBASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 AL139421.1-201ENST00000423010 169 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms