Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 RPS24P13-201ENST00000442520 397 ntBASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 TPRKBP1-201ENST00000456243 481 ntBASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 RPL21P47-201ENST00000483696 477 ntBASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 MLLT10P2-201ENST00000506434 249 ntBASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 AC010468.3-201ENST00000508225 458 ntBASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 OSBPL9P3-201ENST00000534523 595 ntBASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 MTCO3P24-201ENST00000572729 782 ntBASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 LARP7P3-201ENST00000579888 337 ntBASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 AC096947.1-201ENST00000603233 470 ntBASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 AC012467.1-201ENST00000607740 256 ntBASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 AC107871.2-201ENST00000612894 502 ntBASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 AC006386.2-201ENST00000624491 75 ntBASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 AC012005.1-201ENST00000624575 75 ntBASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 AC090897.3-201ENST00000636973 1157 ntBASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.44□□□□□ -2.02
ZIC4Q8N9L1 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 MTND4P13-201ENST00000402078 1023 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 TMSB4XP8-201ENST00000402089 135 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 UBE2V1P15-201ENST00000407776 448 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 TMSB4XP6-201ENST00000415187 135 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 MRPL50P2-201ENST00000416821 482 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AC099677.1-201ENST00000420575 175 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 COTL1P1-201ENST00000422309 375 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 TMSB4XP1-201ENST00000424567 135 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 MTATP6P4-201ENST00000427725 675 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AC104332.2-201ENST00000429959 156 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AC105272.1-201ENST00000438604 198 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 TRIM60P18-201ENST00000441518 828 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 RPS20P24-201ENST00000457473 361 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AC090525.1-201ENST00000479116 478 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 VPS26AP1-201ENST00000483197 979 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AC096751.1-202ENST00000502691 1067 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 MTND3P24-201ENST00000506306 329 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 SNORA31.8-201ENST00000516327 108 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 SNORA9.3-201ENST00000516383 129 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 SNRPGP16-201ENST00000533275 226 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AC018630.1-201ENST00000541376 925 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AC126177.3-201ENST00000551839 688 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AC138761.3-201ENST00000579993 334 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 ELOCP29-201ENST00000588193 334 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AC009220.3-201ENST00000604318 586 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AP001330.4-201ENST00000604350 154 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AC111188.2-201ENST00000529697 1387 ntBASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
ZIC4Q8N9L1 AL136520.1-201ENST00000600311 1322 ntBASIC2.42□□□□□ -2.02
ZIC4Q8N9L1 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
ZIC4Q8N9L1 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ZIC4Q8N9L1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
ZIC4Q8N9L1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
ZIC4Q8N9L1 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.42□□□□□ -2.02
ZIC4Q8N9L1 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ZIC4Q8N9L1 RNU6-650P-201ENST00000365658 111 ntBASIC2.42□□□□□ -2.02
ZIC4Q8N9L1 RNU6-1074P-201ENST00000383995 104 ntBASIC2.42□□□□□ -2.02
ZIC4Q8N9L1 AL360182.1-201ENST00000397433 468 ntBASIC2.42□□□□□ -2.02
ZIC4Q8N9L1 RNA5SP21-201ENST00000410917 96 ntBASIC2.42□□□□□ -2.02
ZIC4Q8N9L1 UBE2D3P2-201ENST00000424409 445 ntBASIC2.42□□□□□ -2.02
ZIC4Q8N9L1 AC091390.3-201ENST00000426478 338 ntBASIC2.42□□□□□ -2.02
ZIC4Q8N9L1 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.42□□□□□ -2.02
ZIC4Q8N9L1 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.42□□□□□ -2.02
ZIC4Q8N9L1 AC025750.2-201ENST00000442609 450 ntBASIC2.42□□□□□ -2.02
ZIC4Q8N9L1 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.42□□□□□ -2.02
ZIC4Q8N9L1 MTND2P3-201ENST00000452458 470 ntBASIC2.42□□□□□ -2.02
ZIC4Q8N9L1 RPL23AP31-201ENST00000456160 467 ntBASIC2.42□□□□□ -2.02
ZIC4Q8N9L1 AC103975.1-201ENST00000482506 483 ntBASIC2.42□□□□□ -2.02
ZIC4Q8N9L1 AC096576.1-201ENST00000489014 359 ntBASIC2.42□□□□□ -2.02
ZIC4Q8N9L1 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms