Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 MTND5P14-201ENST00000441481 1267 ntBASIC3.8□□□□□ -1.8
SCML4Q8N228 PAXBP1P1-201ENST00000449315 447 ntBASIC3.8□□□□□ -1.8
SCML4Q8N228 RPL23AP35-201ENST00000451906 501 ntBASIC3.8□□□□□ -1.8
SCML4Q8N228 ART2BP-201ENST00000453501 499 ntBASIC3.8□□□□□ -1.8
SCML4Q8N228 ATG12P2-201ENST00000456830 416 ntBASIC3.8□□□□□ -1.8
SCML4Q8N228 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.8□□□□□ -1.8
SCML4Q8N228 MEMO1P3-201ENST00000459811 302 ntBASIC3.8□□□□□ -1.8
SCML4Q8N228 AC091564.1-201ENST00000464563 479 ntBASIC3.8□□□□□ -1.8
SCML4Q8N228 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.8□□□□□ -1.8
SCML4Q8N228 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.8□□□□□ -1.8
SCML4Q8N228 RN7SKP83-201ENST00000516512 178 ntBASIC3.8□□□□□ -1.8
SCML4Q8N228 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCML4Q8N228 GTF2IP22-201ENST00000554443 182 ntBASIC3.8□□□□□ -1.8
SCML4Q8N228 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.8□□□□□ -1.8
SCML4Q8N228 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.8□□□□□ -1.8
SCML4Q8N228 AL031281.1-201ENST00000604049 488 ntBASIC3.8□□□□□ -1.8
SCML4Q8N228 AL034351.1-201ENST00000605288 668 ntBASIC3.8□□□□□ -1.8
SCML4Q8N228 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.8□□□□□ -1.8
SCML4Q8N228 AL355810.1-201ENST00000614629 552 ntBASIC3.8□□□□□ -1.8
SCML4Q8N228 AC006133.1-201ENST00000617106 264 ntBASIC3.8□□□□□ -1.8
SCML4Q8N228 AC131159.1-201ENST00000621854 213 ntBASIC3.8□□□□□ -1.8
SCML4Q8N228 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SCML4Q8N228 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCML4Q8N228 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SCML4Q8N228 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCML4Q8N228 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
SCML4Q8N228 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCML4Q8N228 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.8□□□□□ -1.8
SCML4Q8N228 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCML4Q8N228 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SCML4Q8N228 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCML4Q8N228 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.79□□□□□ -1.8
SCML4Q8N228 SNORD9-201ENST00000362566 104 ntBASIC3.79□□□□□ -1.8
SCML4Q8N228 RNU6-359P-201ENST00000365466 108 ntBASIC3.79□□□□□ -1.8
SCML4Q8N228 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SCML4Q8N228 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SCML4Q8N228 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.79□□□□□ -1.8
SCML4Q8N228 CCDC58P2-201ENST00000417131 366 ntBASIC3.79□□□□□ -1.8
SCML4Q8N228 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.79□□□□□ -1.8
SCML4Q8N228 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.79□□□□□ -1.8
SCML4Q8N228 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.79□□□□□ -1.8
SCML4Q8N228 YWHAZP7-201ENST00000436906 631 ntBASIC3.79□□□□□ -1.8
SCML4Q8N228 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.79□□□□□ -1.8
SCML4Q8N228 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.79□□□□□ -1.8
SCML4Q8N228 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.79□□□□□ -1.8
SCML4Q8N228 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.79□□□□□ -1.8
SCML4Q8N228 CEACAMP4-201ENST00000457676 421 ntBASIC3.79□□□□□ -1.8
SCML4Q8N228 SNORA84-201ENST00000459229 133 ntBASIC3.79□□□□□ -1.8
SCML4Q8N228 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.79□□□□□ -1.8
SCML4Q8N228 RPS3AP22-201ENST00000488297 769 ntBASIC3.79□□□□□ -1.8
SCML4Q8N228 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.79□□□□□ -1.8
SCML4Q8N228 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.79□□□□□ -1.8
SCML4Q8N228 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.79□□□□□ -1.8
SCML4Q8N228 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.79□□□□□ -1.8
SCML4Q8N228 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.79□□□□□ -1.8
SCML4Q8N228 AC002400.1-201ENST00000569310 726 ntBASIC3.79□□□□□ -1.8
SCML4Q8N228 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SCML4Q8N228 AL133507.1-201ENST00000605269 557 ntBASIC3.79□□□□□ -1.8
SCML4Q8N228 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SCML4Q8N228 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.79□□□□□ -1.8
SCML4Q8N228 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.79□□□□□ -1.8
SCML4Q8N228 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.79□□□□□ -1.8
SCML4Q8N228 AC244205.2-202ENST00000635781 342 ntBASIC3.79□□□□□ -1.8
SCML4Q8N228 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.79□□□□□ -1.8
SCML4Q8N228 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.79□□□□□ -1.8
SCML4Q8N228 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCML4Q8N228 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCML4Q8N228 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCML4Q8N228 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SCML4Q8N228 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SCML4Q8N228 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCML4Q8N228 AC066616.2-201ENST00000559334 1481 ntBASIC3.79□□□□□ -1.8
SCML4Q8N228 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SCML4Q8N228 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SCML4Q8N228 EXOC5P1-201ENST00000510543 1969 ntBASIC3.78□□□□□ -1.8
SCML4Q8N228 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
SCML4Q8N228 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SCML4Q8N228 RNA5SP42-201ENST00000364278 115 ntBASIC3.78□□□□□ -1.8
SCML4Q8N228 SNORD6-201ENST00000365444 73 ntBASIC3.78□□□□□ -1.8
SCML4Q8N228 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.78□□□□□ -1.8
SCML4Q8N228 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.78□□□□□ -1.8
SCML4Q8N228 U3.39-201ENST00000408569 239 ntBASIC3.78□□□□□ -1.8
SCML4Q8N228 RNU4-65P-201ENST00000410473 140 ntBASIC3.78□□□□□ -1.8
SCML4Q8N228 RNU2-47P-201ENST00000410649 186 ntBASIC3.78□□□□□ -1.8
SCML4Q8N228 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.78□□□□□ -1.8
SCML4Q8N228 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.78□□□□□ -1.8
SCML4Q8N228 AC006989.1-201ENST00000427212 131 ntBASIC3.78□□□□□ -1.8
SCML4Q8N228 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.78□□□□□ -1.8
SCML4Q8N228 SKP1P1-201ENST00000438081 489 ntBASIC3.78□□□□□ -1.8
SCML4Q8N228 AC004866.2-201ENST00000438285 481 ntBASIC3.78□□□□□ -1.8
SCML4Q8N228 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.78□□□□□ -1.8
SCML4Q8N228 AC002381.1-201ENST00000447049 280 ntBASIC3.78□□□□□ -1.8
SCML4Q8N228 AC073387.1-201ENST00000453261 709 ntBASIC3.78□□□□□ -1.8
SCML4Q8N228 BX322784.1-201ENST00000455793 1077 ntBASIC3.78□□□□□ -1.8
SCML4Q8N228 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.78□□□□□ -1.8
SCML4Q8N228 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
SCML4Q8N228 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.78□□□□□ -1.8
SCML4Q8N228 AC117522.2-201ENST00000510049 657 ntBASIC3.78□□□□□ -1.8
SCML4Q8N228 AC010486.3-201ENST00000511602 785 ntBASIC3.78□□□□□ -1.8
SCML4Q8N228 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms