Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.82□□□□□ -1.64
SYNE4Q8N205 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.82□□□□□ -1.64
SYNE4Q8N205 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SYNE4Q8N205 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SYNE4Q8N205 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
SYNE4Q8N205 MTND4P12-201ENST00000498999 1377 ntBASIC4.82□□□□□ -1.64
SYNE4Q8N205 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SYNE4Q8N205 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SYNE4Q8N205 RNA5SP51-201ENST00000364750 119 ntBASIC4.82□□□□□ -1.64
SYNE4Q8N205 RNU6-723P-201ENST00000383973 107 ntBASIC4.82□□□□□ -1.64
SYNE4Q8N205 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SYNE4Q8N205 AL450338.1-201ENST00000407987 512 ntBASIC4.82□□□□□ -1.64
SYNE4Q8N205 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SYNE4Q8N205 AL136133.1-201ENST00000413694 376 ntBASIC4.82□□□□□ -1.64
SYNE4Q8N205 USP9YP13-201ENST00000417797 480 ntBASIC4.82□□□□□ -1.64
SYNE4Q8N205 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.82□□□□□ -1.64
SYNE4Q8N205 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SYNE4Q8N205 RPS26P40-201ENST00000435209 294 ntBASIC4.82□□□□□ -1.64
SYNE4Q8N205 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.82□□□□□ -1.64
SYNE4Q8N205 AL451074.3-201ENST00000437709 472 ntBASIC4.82□□□□□ -1.64
SYNE4Q8N205 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.82□□□□□ -1.64
SYNE4Q8N205 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.82□□□□□ -1.64
SYNE4Q8N205 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.82□□□□□ -1.64
SYNE4Q8N205 RN7SL585P-201ENST00000470538 280 ntBASIC4.82□□□□□ -1.64
SYNE4Q8N205 HMGN1P10-201ENST00000474557 553 ntBASIC4.82□□□□□ -1.64
SYNE4Q8N205 MTCYBP17-201ENST00000503579 789 ntBASIC4.82□□□□□ -1.64
SYNE4Q8N205 AC019235.1-201ENST00000503847 207 ntBASIC4.82□□□□□ -1.64
SYNE4Q8N205 HMGB1P28-201ENST00000507778 552 ntBASIC4.82□□□□□ -1.64
SYNE4Q8N205 RNU6-1153P-201ENST00000516760 105 ntBASIC4.82□□□□□ -1.64
SYNE4Q8N205 IGKV2-38-201ENST00000517443 247 ntBASIC4.82□□□□□ -1.64
SYNE4Q8N205 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.82□□□□□ -1.64
SYNE4Q8N205 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.82□□□□□ -1.64
SYNE4Q8N205 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.82□□□□□ -1.64
SYNE4Q8N205 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.82□□□□□ -1.64
SYNE4Q8N205 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.82□□□□□ -1.64
SYNE4Q8N205 AL596327.1-201ENST00000603629 213 ntBASIC4.82□□□□□ -1.64
SYNE4Q8N205 AC104662.1-201ENST00000604448 511 ntBASIC4.82□□□□□ -1.64
SYNE4Q8N205 AC103710.4-201ENST00000609301 899 ntBASIC4.82□□□□□ -1.64
SYNE4Q8N205 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SYNE4Q8N205 AC005332.6-201ENST00000613178 446 ntBASIC4.82□□□□□ -1.64
SYNE4Q8N205 AC002553.4-201ENST00000616896 331 ntBASIC4.82□□□□□ -1.64
SYNE4Q8N205 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.82□□□□□ -1.64
SYNE4Q8N205 AC092650.2-201ENST00000619984 902 ntBASIC4.82□□□□□ -1.64
SYNE4Q8N205 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.82□□□□□ -1.64
SYNE4Q8N205 CR392039.4-201ENST00000624968 501 ntBASIC4.82□□□□□ -1.64
SYNE4Q8N205 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SYNE4Q8N205 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SYNE4Q8N205 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SYNE4Q8N205 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SYNE4Q8N205 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.82□□□□□ -1.64
SYNE4Q8N205 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SYNE4Q8N205 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SYNE4Q8N205 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
SYNE4Q8N205 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SYNE4Q8N205 Y_RNA.9-201ENST00000362354 101 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 RNU6-1011P-201ENST00000384668 107 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 FCF1P10-201ENST00000407590 479 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 SNORA3C-201ENST00000408792 125 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 RPL7AP73-201ENST00000413490 353 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 FCF1P2-201ENST00000415284 583 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.81□□□□□ -1.64
SYNE4Q8N205 ELOCP14-201ENST00000428070 331 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 AL513175.1-201ENST00000431492 780 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 AL159987.2-201ENST00000432754 307 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 ELOCP7-201ENST00000439968 331 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.81□□□□□ -1.64
SYNE4Q8N205 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.81□□□□□ -1.64
SYNE4Q8N205 RPL7P36-201ENST00000444633 681 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 RPL18AP17-201ENST00000455326 198 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 BX322784.1-201ENST00000455793 1077 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 RPL21P71-201ENST00000465598 459 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 LARP1BP2-201ENST00000486594 519 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 RPL7P24-201ENST00000493052 752 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.81□□□□□ -1.64
SYNE4Q8N205 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.81□□□□□ -1.64
SYNE4Q8N205 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.81□□□□□ -1.64
SYNE4Q8N205 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.81□□□□□ -1.64
SYNE4Q8N205 AC108078.1-201ENST00000508073 725 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 NDUFB4P2-201ENST00000509515 391 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.81□□□□□ -1.64
SYNE4Q8N205 RNU6-202P-201ENST00000515998 96 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.81□□□□□ -1.64
SYNE4Q8N205 AP001189.2-201ENST00000527320 189 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 DEFB109D-201ENST00000529497 240 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
SYNE4Q8N205 AC008687.2-201ENST00000597865 520 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.81□□□□□ -1.64
SYNE4Q8N205 AC010200.2-201ENST00000605098 235 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 AL365503.1-201ENST00000605247 905 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 AL390208.1-201ENST00000605885 644 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 AL355816.1-201ENST00000607951 118 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 AL359697.1-201ENST00000624879 587 ntBASIC4.81□□□□□ -1.64
SYNE4Q8N205 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.81□□□□□ -1.64
SYNE4Q8N205 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SYNE4Q8N205 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SYNE4Q8N205 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SYNE4Q8N205 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
SYNE4Q8N205 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SYNE4Q8N205 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SYNE4Q8N205 AC134882.1-201ENST00000603738 1676 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms