Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.43□□□□□ -2.02
DDX60Q8IY21 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.43□□□□□ -2.02
DDX60Q8IY21 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.43□□□□□ -2.02
DDX60Q8IY21 FABP5P13-201ENST00000452144 328 ntBASIC2.43□□□□□ -2.02
DDX60Q8IY21 MTCYBP14-201ENST00000457471 715 ntBASIC2.43□□□□□ -2.02
DDX60Q8IY21 AC007182.2-201ENST00000489251 402 ntBASIC2.43□□□□□ -2.02
DDX60Q8IY21 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
DDX60Q8IY21 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.43□□□□□ -2.02
DDX60Q8IY21 Y_RNA.783-201ENST00000613546 102 ntBASIC2.43□□□□□ -2.02
DDX60Q8IY21 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.43□□□□□ -2.02
DDX60Q8IY21 RPL23AP36-201ENST00000413895 458 ntBASIC2.42□□□□□ -2.02
DDX60Q8IY21 CYCSP49-201ENST00000420810 319 ntBASIC2.42□□□□□ -2.02
DDX60Q8IY21 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.42□□□□□ -2.02
DDX60Q8IY21 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.42□□□□□ -2.02
DDX60Q8IY21 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.42□□□□□ -2.02
DDX60Q8IY21 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.42□□□□□ -2.02
DDX60Q8IY21 AC108729.3-201ENST00000513484 108 ntBASIC2.42□□□□□ -2.02
DDX60Q8IY21 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.42□□□□□ -2.02
DDX60Q8IY21 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.42□□□□□ -2.02
DDX60Q8IY21 AC023043.2-201ENST00000589678 1026 ntBASIC2.42□□□□□ -2.02
DDX60Q8IY21 AC128687.1-201ENST00000605304 619 ntBASIC2.42□□□□□ -2.02
DDX60Q8IY21 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.42□□□□□ -2.02
DDX60Q8IY21 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.42□□□□□ -2.02
DDX60Q8IY21 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.42□□□□□ -2.02
DDX60Q8IY21 Y_RNA.338-201ENST00000365320 114 ntBASIC2.42□□□□□ -2.02
DDX60Q8IY21 SNORA40.18-201ENST00000391200 128 ntBASIC2.42□□□□□ -2.02
DDX60Q8IY21 RNU6-321P-201ENST00000410912 106 ntBASIC2.42□□□□□ -2.02
DDX60Q8IY21 OR52A4P-203ENST00000498233 1014 ntBASIC2.42□□□□□ -2.02
DDX60Q8IY21 SNORA31.11-201ENST00000516528 139 ntBASIC2.42□□□□□ -2.02
DDX60Q8IY21 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.42□□□□□ -2.02
DDX60Q8IY21 AC008687.2-201ENST00000597865 520 ntBASIC2.42□□□□□ -2.02
DDX60Q8IY21 AL049779.4-201ENST00000604500 156 ntBASIC2.42□□□□□ -2.02
DDX60Q8IY21 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.42□□□□□ -2.02
DDX60Q8IY21 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.42□□□□□ -2.02
DDX60Q8IY21 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.42□□□□□ -2.02
DDX60Q8IY21 AC009452.1-201ENST00000640823 606 ntBASIC2.42□□□□□ -2.02
DDX60Q8IY21 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
DDX60Q8IY21 RPL23AP39-201ENST00000415533 405 ntBASIC2.41□□□□□ -2.02
DDX60Q8IY21 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.41□□□□□ -2.02
DDX60Q8IY21 AC233279.1-201ENST00000455300 423 ntBASIC2.41□□□□□ -2.02
DDX60Q8IY21 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.41□□□□□ -2.02
DDX60Q8IY21 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.41□□□□□ -2.02
DDX60Q8IY21 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.41□□□□□ -2.02
DDX60Q8IY21 OR4U1P-201ENST00000554958 912 ntBASIC2.41□□□□□ -2.02
DDX60Q8IY21 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.41□□□□□ -2.02
DDX60Q8IY21 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.41□□□□□ -2.02
DDX60Q8IY21 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.41□□□□□ -2.02
DDX60Q8IY21 AL513331.1-201ENST00000411908 397 ntBASIC2.4□□□□□ -2.02
DDX60Q8IY21 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.4□□□□□ -2.02
DDX60Q8IY21 AC108667.1-201ENST00000428618 249 ntBASIC2.4□□□□□ -2.02
DDX60Q8IY21 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.4□□□□□ -2.02
DDX60Q8IY21 AC017007.3-201ENST00000479865 435 ntBASIC2.4□□□□□ -2.02
DDX60Q8IY21 AC091917.2-201ENST00000505002 744 ntBASIC2.4□□□□□ -2.02
DDX60Q8IY21 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.4□□□□□ -2.02
DDX60Q8IY21 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.4□□□□□ -2.02
DDX60Q8IY21 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.4□□□□□ -2.02
DDX60Q8IY21 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.4□□□□□ -2.02
DDX60Q8IY21 AP001148.1-201ENST00000624124 2359 ntBASIC2.4□□□□□ -2.03
DDX60Q8IY21 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
DDX60Q8IY21 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
DDX60Q8IY21 VTRNA1-1-201ENST00000363120 99 ntBASIC2.39□□□□□ -2.03
DDX60Q8IY21 RNU6-14P-201ENST00000384630 106 ntBASIC2.39□□□□□ -2.03
DDX60Q8IY21 WARS2P1-201ENST00000429678 537 ntBASIC2.39□□□□□ -2.03
DDX60Q8IY21 MTAPP1-201ENST00000489154 819 ntBASIC2.39□□□□□ -2.03
DDX60Q8IY21 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.39□□□□□ -2.03
DDX60Q8IY21 RPP40P2-201ENST00000603596 712 ntBASIC2.39□□□□□ -2.03
DDX60Q8IY21 RPL23AP88-201ENST00000605759 454 ntBASIC2.39□□□□□ -2.03
DDX60Q8IY21 VIS1.1-201ENST00000610517 203 ntBASIC2.39□□□□□ -2.03
DDX60Q8IY21 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.39□□□□□ -2.03
DDX60Q8IY21 AC092159.4-201ENST00000624944 550 ntBASIC2.39□□□□□ -2.03
DDX60Q8IY21 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
DDX60Q8IY21 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
DDX60Q8IY21 MTCO1P14-201ENST00000441695 1559 ntBASIC2.39□□□□□ -2.03
DDX60Q8IY21 RNA5SP160-201ENST00000364866 120 ntBASIC2.39□□□□□ -2.03
DDX60Q8IY21 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
DDX60Q8IY21 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
DDX60Q8IY21 AC240504.1-201ENST00000395709 845 ntBASIC2.39□□□□□ -2.03
DDX60Q8IY21 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.39□□□□□ -2.03
DDX60Q8IY21 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.39□□□□□ -2.03
DDX60Q8IY21 AC006483.1-201ENST00000487308 313 ntBASIC2.39□□□□□ -2.03
DDX60Q8IY21 AC090695.1-201ENST00000561269 1222 ntBASIC2.39□□□□□ -2.03
DDX60Q8IY21 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.39□□□□□ -2.03
DDX60Q8IY21 RNA5SP37-201ENST00000365420 130 ntBASIC2.38□□□□□ -2.03
DDX60Q8IY21 MIR1287-201ENST00000408492 90 ntBASIC2.38□□□□□ -2.03
DDX60Q8IY21 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC2.38□□□□□ -2.03
DDX60Q8IY21 OR4K11P-201ENST00000431829 904 ntBASIC2.38□□□□□ -2.03
DDX60Q8IY21 AC079804.2-201ENST00000490376 200 ntBASIC2.38□□□□□ -2.03
DDX60Q8IY21 SCARNA17.1-201ENST00000516211 143 ntBASIC2.38□□□□□ -2.03
DDX60Q8IY21 SCARNA17.2-201ENST00000516334 143 ntBASIC2.38□□□□□ -2.03
DDX60Q8IY21 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.38□□□□□ -2.03
DDX60Q8IY21 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC2.38□□□□□ -2.03
DDX60Q8IY21 SCARNA17.4-201ENST00000614296 143 ntBASIC2.38□□□□□ -2.03
DDX60Q8IY21 AL121594.5-201ENST00000631724 573 ntBASIC2.38□□□□□ -2.03
DDX60Q8IY21 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
DDX60Q8IY21 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
DDX60Q8IY21 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.37□□□□□ -2.03
DDX60Q8IY21 LUZP4P1-201ENST00000415420 344 ntBASIC2.37□□□□□ -2.03
DDX60Q8IY21 DPPA2P1-201ENST00000428060 556 ntBASIC2.37□□□□□ -2.03
DDX60Q8IY21 AL157827.1-201ENST00000447622 132 ntBASIC2.37□□□□□ -2.03
DDX60Q8IY21 RPL23AP20-201ENST00000447965 421 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms