Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 AP001486.2-201ENST00000561652 5113 ntBASIC4.48□□□□□ -1.69
SMC5Q8IY18 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMC5Q8IY18 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.48□□□□□ -1.69
SMC5Q8IY18 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.48□□□□□ -1.69
SMC5Q8IY18 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMC5Q8IY18 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
SMC5Q8IY18 MIR493-201ENST00000385254 89 ntBASIC4.48□□□□□ -1.69
SMC5Q8IY18 RPS3AP24-201ENST00000407896 734 ntBASIC4.48□□□□□ -1.69
SMC5Q8IY18 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.48□□□□□ -1.69
SMC5Q8IY18 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SMC5Q8IY18 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.48□□□□□ -1.69
SMC5Q8IY18 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.48□□□□□ -1.69
SMC5Q8IY18 AC112653.1-201ENST00000443851 386 ntBASIC4.48□□□□□ -1.69
SMC5Q8IY18 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.48□□□□□ -1.69
SMC5Q8IY18 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.48□□□□□ -1.69
SMC5Q8IY18 AC092754.2-201ENST00000463506 460 ntBASIC4.48□□□□□ -1.69
SMC5Q8IY18 RPL30P9-201ENST00000465586 330 ntBASIC4.48□□□□□ -1.69
SMC5Q8IY18 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.48□□□□□ -1.69
SMC5Q8IY18 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.48□□□□□ -1.69
SMC5Q8IY18 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.48□□□□□ -1.69
SMC5Q8IY18 FAM60DP-201ENST00000524174 632 ntBASIC4.48□□□□□ -1.69
SMC5Q8IY18 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.48□□□□□ -1.69
SMC5Q8IY18 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMC5Q8IY18 SETP2-201ENST00000553886 926 ntBASIC4.48□□□□□ -1.69
SMC5Q8IY18 AL163153.1-201ENST00000554223 283 ntBASIC4.48□□□□□ -1.69
SMC5Q8IY18 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SMC5Q8IY18 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.48□□□□□ -1.69
SMC5Q8IY18 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.48□□□□□ -1.69
SMC5Q8IY18 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SMC5Q8IY18 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.48□□□□□ -1.69
SMC5Q8IY18 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.48□□□□□ -1.69
SMC5Q8IY18 VN1R92P-201ENST00000598511 928 ntBASIC4.48□□□□□ -1.69
SMC5Q8IY18 AC022149.2-201ENST00000621061 203 ntBASIC4.48□□□□□ -1.69
SMC5Q8IY18 AC006111.3-201ENST00000622137 383 ntBASIC4.48□□□□□ -1.69
SMC5Q8IY18 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.47□□□□□ -1.69
SMC5Q8IY18 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.47□□□□□ -1.69
SMC5Q8IY18 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SMC5Q8IY18 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.47□□□□□ -1.69
SMC5Q8IY18 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.47□□□□□ -1.69
SMC5Q8IY18 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SMC5Q8IY18 RNU5A-1-201ENST00000362698 116 ntBASIC4.47□□□□□ -1.69
SMC5Q8IY18 RNU6-931P-201ENST00000363850 107 ntBASIC4.47□□□□□ -1.69
SMC5Q8IY18 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SMC5Q8IY18 RNU6-253P-201ENST00000384730 105 ntBASIC4.47□□□□□ -1.69
SMC5Q8IY18 SNORA57.3-201ENST00000411095 141 ntBASIC4.47□□□□□ -1.69
SMC5Q8IY18 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.47□□□□□ -1.69
SMC5Q8IY18 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.47□□□□□ -1.69
SMC5Q8IY18 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SMC5Q8IY18 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.47□□□□□ -1.69
SMC5Q8IY18 AC108734.1-201ENST00000439549 399 ntBASIC4.47□□□□□ -1.69
SMC5Q8IY18 RPS29P7-201ENST00000439662 171 ntBASIC4.47□□□□□ -1.69
SMC5Q8IY18 MRPS31P2-201ENST00000451581 518 ntBASIC4.47□□□□□ -1.69
SMC5Q8IY18 RNA5SP310-201ENST00000459084 116 ntBASIC4.47□□□□□ -1.69
SMC5Q8IY18 AC004801.2-202ENST00000463559 283 ntBASIC4.47□□□□□ -1.69
SMC5Q8IY18 AC034222.1-201ENST00000494052 532 ntBASIC4.47□□□□□ -1.69
SMC5Q8IY18 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.47□□□□□ -1.69
SMC5Q8IY18 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.47□□□□□ -1.69
SMC5Q8IY18 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.47□□□□□ -1.69
SMC5Q8IY18 AC034159.1-201ENST00000513885 583 ntBASIC4.47□□□□□ -1.69
SMC5Q8IY18 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.47□□□□□ -1.69
SMC5Q8IY18 AC026333.2-201ENST00000542164 106 ntBASIC4.47□□□□□ -1.69
SMC5Q8IY18 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.47□□□□□ -1.69
SMC5Q8IY18 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.47□□□□□ -1.69
SMC5Q8IY18 AC009097.3-201ENST00000563557 1018 ntBASIC4.47□□□□□ -1.69
SMC5Q8IY18 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.47□□□□□ -1.69
SMC5Q8IY18 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.47□□□□□ -1.69
SMC5Q8IY18 AC107952.2-201ENST00000606048 486 ntBASIC4.47□□□□□ -1.69
SMC5Q8IY18 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.47□□□□□ -1.69
SMC5Q8IY18 AL450472.3-201ENST00000615578 367 ntBASIC4.47□□□□□ -1.69
SMC5Q8IY18 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SMC5Q8IY18 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SMC5Q8IY18 AL357559.1-201ENST00000622228 274 ntBASIC4.47□□□□□ -1.69
SMC5Q8IY18 AC079597.1-201ENST00000624306 508 ntBASIC4.47□□□□□ -1.69
SMC5Q8IY18 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.47□□□□□ -1.69
SMC5Q8IY18 TNPO1P3-201ENST00000436471 2662 ntBASIC4.47□□□□□ -1.69
SMC5Q8IY18 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SMC5Q8IY18 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SMC5Q8IY18 MFSD8-236ENST00000641509 4050 ntBASIC4.46□□□□□ -1.7
SMC5Q8IY18 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SMC5Q8IY18 RN7SKP280-201ENST00000364196 304 ntBASIC4.46□□□□□ -1.7
SMC5Q8IY18 RNA5SP51-201ENST00000364750 119 ntBASIC4.46□□□□□ -1.7
SMC5Q8IY18 MIR184-201ENST00000384962 84 ntBASIC4.46□□□□□ -1.7
SMC5Q8IY18 RPL32P23-201ENST00000397237 405 ntBASIC4.46□□□□□ -1.7
SMC5Q8IY18 AL136116.1-201ENST00000403591 381 ntBASIC4.46□□□□□ -1.7
SMC5Q8IY18 MTCO1P17-201ENST00000411522 491 ntBASIC4.46□□□□□ -1.7
SMC5Q8IY18 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.46□□□□□ -1.7
SMC5Q8IY18 UBE2D3P2-201ENST00000424409 445 ntBASIC4.46□□□□□ -1.7
SMC5Q8IY18 MTATP6P4-201ENST00000427725 675 ntBASIC4.46□□□□□ -1.7
SMC5Q8IY18 TXNL1P1-201ENST00000429528 554 ntBASIC4.46□□□□□ -1.7
SMC5Q8IY18 OR4K11P-201ENST00000431829 904 ntBASIC4.46□□□□□ -1.7
SMC5Q8IY18 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.46□□□□□ -1.7
SMC5Q8IY18 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.46□□□□□ -1.7
SMC5Q8IY18 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SMC5Q8IY18 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.46□□□□□ -1.7
SMC5Q8IY18 AC093809.1-201ENST00000509155 340 ntBASIC4.46□□□□□ -1.7
SMC5Q8IY18 SNORA3.4-201ENST00000515969 96 ntBASIC4.46□□□□□ -1.7
SMC5Q8IY18 AP000926.4-201ENST00000527351 454 ntBASIC4.46□□□□□ -1.7
SMC5Q8IY18 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.46□□□□□ -1.7
SMC5Q8IY18 MIR3160-1-201ENST00000577972 85 ntBASIC4.46□□□□□ -1.7
SMC5Q8IY18 MIR5685-201ENST00000579080 79 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms