Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 RPL23AP62-201ENST00000463396 453 ntBASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 SNRPGP3-201ENST00000469405 227 ntBASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 AC093767.1-201ENST00000504523 156 ntBASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 MTCO3P44-201ENST00000510977 541 ntBASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 AC112673.1-201ENST00000513168 575 ntBASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 AL158211.1-201ENST00000566763 763 ntBASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 LARP7P2-201ENST00000575306 125 ntBASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 OR4K7P-201ENST00000580232 945 ntBASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 AC025588.2-201ENST00000604851 466 ntBASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 AL158042.1-201ENST00000605338 460 ntBASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 AC012531.5-201ENST00000611375 151 ntBASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 AC092650.2-201ENST00000619984 902 ntBASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 AP000484.1-201ENST00000620067 1252 ntBASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 AC009318.4-201ENST00000620496 486 ntBASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 FAM133CP-201ENST00000332869 704 ntBASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 SNRPEP3-201ENST00000338402 276 ntBASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 RNU6-600P-201ENST00000362524 99 ntBASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 RNU4-28P-201ENST00000364739 141 ntBASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 SNORD6-201ENST00000365444 73 ntBASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 SNORD82-201ENST00000365530 70 ntBASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 Y_RNA.493-201ENST00000384422 102 ntBASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 RNU6-1122P-201ENST00000384449 107 ntBASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 MIR506-201ENST00000384998 124 ntBASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 AL024474.1-201ENST00000404655 591 ntBASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 Z92545.1-201ENST00000411782 234 ntBASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 AC006960.1-201ENST00000419980 153 ntBASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 HMGB3P8-201ENST00000449709 577 ntBASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 SLC31A1P1-201ENST00000451221 567 ntBASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 RPS3AP43-201ENST00000479743 781 ntBASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 MTCYBP17-201ENST00000503579 789 ntBASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 AC034244.1-201ENST00000507687 207 ntBASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 AC010587.2-201ENST00000511727 448 ntBASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 AC004024.1-201ENST00000549244 247 ntBASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 MIR4425-201ENST00000580572 84 ntBASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 AC009220.3-201ENST00000604318 586 ntBASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 AC103710.3-201ENST00000608157 948 ntBASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 TUSC7.1-201ENST00000610969 165 ntBASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC60Q8IWA6 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CCDC60Q8IWA6 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.59□□□□□ -1.84
CCDC60Q8IWA6 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 RNU6-525P-201ENST00000363685 104 ntBASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 RNU6-263P-201ENST00000363811 107 ntBASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 Y_RNA.311-201ENST00000365068 96 ntBASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 SNORA48.5-201ENST00000391143 135 ntBASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 RPL17P50-201ENST00000396131 546 ntBASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 ARF4P3-201ENST00000397387 509 ntBASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 EI24P1-201ENST00000416584 867 ntBASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 AC244098.2-201ENST00000422068 99 ntBASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 AC091390.3-201ENST00000426478 338 ntBASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 BX890604.2-201ENST00000427883 474 ntBASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 CFTRP1-201ENST00000456646 183 ntBASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 snoU13.24-201ENST00000458998 104 ntBASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 PABPC1P3-201ENST00000469174 459 ntBASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 RPS29P2-201ENST00000479278 136 ntBASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 AC108078.3-201ENST00000502633 489 ntBASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms