Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 NUP58P1-201ENST00000502546 1738 ntBASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 AC073325.2-201ENST00000339545 159 ntBASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 MIR22-201ENST00000362190 85 ntBASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 RNU6-492P-201ENST00000363035 104 ntBASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 RPL7P10-201ENST00000417407 739 ntBASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 YPEL5P1-201ENST00000419731 367 ntBASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 AL050321.1-201ENST00000432363 400 ntBASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 RPL21P41-201ENST00000459863 264 ntBASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 FTH1P2-201ENST00000466086 412 ntBASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 RPS29P2-201ENST00000479278 136 ntBASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 PRELID3BP6-201ENST00000503839 571 ntBASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 AC026414.1-201ENST00000504046 698 ntBASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 RNU6-27P-201ENST00000516146 107 ntBASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 AC104417.1-201ENST00000523974 751 ntBASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 MTCO3P15-201ENST00000526563 574 ntBASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 AC087897.1-201ENST00000550134 156 ntBASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 AC068620.3-201ENST00000602749 560 ntBASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 AC124016.2-201ENST00000610058 665 ntBASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 Z99129.2-201ENST00000619967 314 ntBASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 AC244100.1-202ENST00000621554 382 ntBASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 AC026634.1-201ENST00000634369 198 ntBASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 AL136520.1-201ENST00000600311 1322 ntBASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 Z82195.2-201ENST00000612348 18351 ntBASIC3.13□□□□□ -1.91
CCDC50Q8IVM0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 AC244517.1-201ENST00000606030 2086 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 RNU6-707P-201ENST00000364647 95 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 MIR7-3-201ENST00000384898 110 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 MTND4P13-201ENST00000402078 1023 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 RPL7P27-201ENST00000403775 720 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 AL024474.1-201ENST00000404655 591 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 AL590004.2-201ENST00000404787 371 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 RNA5SP120-201ENST00000410900 112 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 AC093155.1-201ENST00000440164 826 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 snoU13.4-201ENST00000458916 104 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 RN7SL601P-201ENST00000471221 293 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 AC013828.1-201ENST00000481845 158 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 RN7SL504P-201ENST00000494496 287 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 AC096751.1-202ENST00000502691 1067 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 AC016550.1-201ENST00000505348 785 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 ARL4AP2-201ENST00000507378 601 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 AC074250.1-201ENST00000511117 192 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 AC008837.1-201ENST00000511513 412 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 AC239860.2-201ENST00000525886 270 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 AC068339.2-201ENST00000534395 618 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 ELOCP31-201ENST00000540463 467 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 AL355812.1-201ENST00000603215 216 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 AC091946.2-201ENST00000606105 291 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 AC253576.2-201ENST00000618815 580 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 AC091925.2-201ENST00000625059 256 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 OR5BR1P-201ENST00000524992 1330 ntBASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC50Q8IVM0 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC50Q8IVM0 HMGB1P5-201ENST00000255320 642 ntBASIC3.11□□□□□ -1.91
CCDC50Q8IVM0 RNU6-1066P-201ENST00000363573 105 ntBASIC3.11□□□□□ -1.91
CCDC50Q8IVM0 SNORA48.7-201ENST00000391302 135 ntBASIC3.11□□□□□ -1.91
CCDC50Q8IVM0 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC50Q8IVM0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CCDC50Q8IVM0 AL035405.1-201ENST00000400795 710 ntBASIC3.11□□□□□ -1.91
CCDC50Q8IVM0 TMSB4XP8-201ENST00000402089 135 ntBASIC3.11□□□□□ -1.91
CCDC50Q8IVM0 RNU2-28P-201ENST00000410457 189 ntBASIC3.11□□□□□ -1.91
CCDC50Q8IVM0 AC096533.1-201ENST00000411645 353 ntBASIC3.11□□□□□ -1.91
CCDC50Q8IVM0 MTATP6P19-201ENST00000413797 659 ntBASIC3.11□□□□□ -1.91
CCDC50Q8IVM0 RPS7P9-201ENST00000414704 586 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms